Converts surface data to pixel data. Requires a surface and an image, which header information defines the output image. More...

#include <mitkSurfaceStampImageFilter.h>

Inheritance diagram for mitk::SurfaceStampImageFilter:

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Collaboration diagram for mitk::SurfaceStampImageFilter:

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Public Types
typedef itk::QuadEdgeMesh< double, 3 >	MeshType

Public Types inherited from mitk::ImageToImageFilter
typedef ImageToImageFilter	Self

typedef ImageSource	Superclass

typedef itk::SmartPointer< Self >	Pointer

typedef itk::SmartPointer< const Self >	ConstPointer

typedef Superclass::OutputImageRegionType	OutputImageRegionType

typedef mitk::Image	InputImageType

typedef InputImageType::Pointer	InputImagePointer

typedef InputImageType::ConstPointer	InputImageConstPointer

typedef SlicedData::RegionType	InputImageRegionType

Public Types inherited from mitk::ImageSource
typedef ImageSource	Self

typedef BaseDataSource	Superclass

typedef itk::SmartPointer< Self >	Pointer

typedef itk::SmartPointer< const Self >	ConstPointer

typedef mitk::Image	OutputImageType
	Some convenient typedefs. More...

typedef OutputImageType	OutputType

typedef OutputImageType::Pointer	OutputImagePointer

typedef SlicedData::RegionType	OutputImageRegionType

Public Types inherited from mitk::BaseDataSource
typedef BaseDataSource	Self

typedef itk::ProcessObject	Superclass

typedef itk::SmartPointer< Self >	Pointer

typedef itk::SmartPointer< const Self >	ConstPointer

typedef BaseData	OutputType

typedef itk::DataObject::DataObjectIdentifierType	DataObjectIdentifierType

Public Member Functions
	mitkClassMacro (SurfaceStampImageFilter, ImageToImageFilter)

virtual void	SetMakeOutputBinary (bool _arg)

virtual bool	GetMakeOutputBinary ()

virtual void	MakeOutputBinaryOn ()

virtual void	MakeOutputBinaryOff ()

virtual void	SetOverwriteBackground (bool _arg)

virtual bool	GetOverwriteBackground ()

virtual void	OverwriteBackgroundOn ()

virtual void	OverwriteBackgroundOff ()

virtual float	GetBackgroundValue () const

virtual void	SetBackgroundValue (float _arg)

virtual float	GetForegroundValue () const

virtual void	SetForegroundValue (float _arg)

virtual void	GenerateInputRequestedRegion ()

virtual void	GenerateOutputInformation ()

virtual void	GenerateData ()
	A version of GenerateData() specific for image processing filters. More...

void	SetSurface (mitk::Surface *surface)

Public Member Functions inherited from mitk::ImageToImageFilter
virtual std::vector< std::string >	GetClassHierarchy () const override

virtual const char *	GetClassName () const

Pointer	Clone () const

virtual void	SetInput (const InputImageType *image)

virtual void	SetInput (unsigned int, const InputImageType *image)

InputImageType *	GetInput (void)

InputImageType *	GetInput (unsigned int idx)

const InputImageType *	GetInput (void) const

const InputImageType *	GetInput (unsigned int idx) const

Public Member Functions inherited from mitk::ImageSource
Pointer	Clone () const

OutputType *	GetOutput ()
	Get the output data of this image source object. More...

const OutputType *	GetOutput () const

OutputType *	GetOutput (DataObjectPointerArraySizeType idx)

const OutputType *	GetOutput (DataObjectPointerArraySizeType idx) const

virtual itk::DataObject::Pointer	MakeOutput (DataObjectPointerArraySizeType idx) override
	Make a DataObject of the correct type to used as the specified output. More...

virtual itk::DataObject::Pointer	MakeOutput (const DataObjectIdentifierType &name) override

virtual vtkImageData *	GetVtkImageData ()

virtual const vtkImageData *	GetVtkImageData () const

Public Member Functions inherited from mitk::BaseDataSource
OutputType *	GetOutput ()

const OutputType *	GetOutput () const

OutputType *	GetOutput (DataObjectPointerArraySizeType idx)

const OutputType *	GetOutput (DataObjectPointerArraySizeType idx) const

virtual void	GraftOutput (OutputType *output)
	Graft the specified BaseData onto this BaseDataSource's output. More...

virtual void	GraftOutput (const DataObjectIdentifierType &key, OutputType *output)

virtual void	GraftNthOutput (unsigned int idx, OutputType *output)
	Graft the specified base data object onto this BaseDataSource's idx'th output. More...

bool	Updating () const
	Access itk::ProcessObject::m_Updating. More...

Static Public Member Functions
static Pointer	New ()

Static Public Member Functions inherited from mitk::ImageToImageFilter
static const char *	GetStaticNameOfClass ()

static Pointer	New ()

Static Public Member Functions inherited from mitk::ImageSource
static const char *	GetStaticNameOfClass ()

static Pointer	New ()
	Method for creation through the object factory. More...

Static Public Member Functions inherited from mitk::BaseDataSource
static const char *	GetStaticNameOfClass ()

Protected Member Functions
	SurfaceStampImageFilter ()

virtual	~SurfaceStampImageFilter ()

void	SurfaceStamp (int time=0)

template<typename TPixel >
void	SurfaceStampProcessing (itk::Image< TPixel, 3 > input, MeshType mesh)

void	SurfaceStampBinaryOutputProcessing (MeshType *mesh)

Protected Member Functions inherited from mitk::ImageToImageFilter
	ImageToImageFilter ()

virtual	~ImageToImageFilter ()

virtual void	PrintSelf (std::ostream &os, itk::Indent indent) const override

Protected Member Functions inherited from mitk::ImageSource
	ImageSource ()

virtual	~ImageSource ()

virtual void	ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, itk::ThreadIdType threadId)
	If an imaging filter can be implemented as a multithreaded algorithm, the filter will provide an implementation of ThreadedGenerateData(). More...

virtual void	PrepareOutputs () override
	This method is intentionally left blank. More...

virtual void	AllocateOutputs ()
	The GenerateData method normally allocates the buffers for all of the outputs of a filter. More...

virtual void	BeforeThreadedGenerateData ()
	If an imaging filter needs to perform processing after the buffer has been allocated but before threads are spawned, the filter can can provide an implementation for BeforeThreadedGenerateData(). More...

virtual void	AfterThreadedGenerateData ()
	If an imaging filter needs to perform processing after all processing threads have completed, the filter can can provide an implementation for AfterThreadedGenerateData(). More...

virtual unsigned int	SplitRequestedRegion (unsigned int i, unsigned int num, OutputImageRegionType &splitRegion)
	Split the output's RequestedRegion into "num" pieces, returning region "i" as "splitRegion". More...

Protected Member Functions inherited from mitk::BaseDataSource
	BaseDataSource ()

virtual	~BaseDataSource ()

Protected Attributes
bool	m_MakeOutputBinary

bool	m_OverwriteBackground

float	m_BackgroundValue

float	m_ForegroundValue

mitk::Surface::Pointer	m_Surface

Additional Inherited Members
Static Protected Member Functions inherited from mitk::ImageSource
static ITK_THREAD_RETURN_TYPE	ThreaderCallback (void *arg)
	Static function used as a "callback" by the MultiThreader. More...

Static Protected Member Functions inherited from mitk::BaseDataSource
static Pointer	New ()

Detailed Description

Converts surface data to pixel data. Requires a surface and an image, which header information defines the output image.

The resulting image has the same dimension, size, and Geometry3D as the input image. The image is cut using a vtkStencil. The user can decide if he wants to keep the original values or create a binary image by setting MakeBinaryOutputOn (default is false). If set to true all voxels inside the surface are set to one and all outside voxel are set to zero.

NOTE: Since the reference input image is passed to the vtkStencil in any case, the image needs to be initialized with pixel values greater than the numerical minimum of the used pixel type (e.g. at least -127 for unsigned char images, etc.) to produce a correct binary image representation of the surface in MakeOutputBinary mode.

Definition at line 52 of file mitkSurfaceStampImageFilter.h.

Member Typedef Documentation

typedef itk::QuadEdgeMesh<double, 3> mitk::SurfaceStampImageFilter::MeshType

Definition at line 80 of file mitkSurfaceStampImageFilter.h.

Constructor & Destructor Documentation

mitk::SurfaceStampImageFilter::SurfaceStampImageFilter ( )

protected

Definition at line 32 of file mitkSurfaceStampImageFilter.cpp.

mitk::SurfaceStampImageFilter::~SurfaceStampImageFilter ( )

protectedvirtual

Definition at line 37 of file mitkSurfaceStampImageFilter.cpp.

Member Function Documentation

void mitk::SurfaceStampImageFilter::GenerateData ( )

virtual

A version of GenerateData() specific for image processing filters.

This implementation will split the processing across multiple threads. The buffer is allocated by this method. Then the BeforeThreadedGenerateData() method is called (if provided). Then, a series of threads are spawned each calling ThreadedGenerateData(). After all the threads have completed processing, the AfterThreadedGenerateData() method is called (if provided). If an image processing filter cannot be threaded, the filter should provide an implementation of GenerateData(). That implementation is responsible for allocating the output buffer. If a filter an be threaded, it should NOT provide a GenerateData() method but should provide a ThreadedGenerateData() instead.

See also: ThreadedGenerateData()

Reimplemented from mitk::ImageSource.

Definition at line 73 of file mitkSurfaceStampImageFilter.cpp.

void mitk::SurfaceStampImageFilter::GenerateInputRequestedRegion ( )

virtual

What is the input requested region that is required to produce the output requested region? The base assumption for image processing filters is that the input requested region can be set to match the output requested region. If a filter requires more input (for instance a filter that uses neighborhoods needs more input than output to avoid introducing artificial boundary conditions) or less input (for instance a magnify filter) will have to override this method. In doing so, it should call its superclass' implementation as its first step. Note that this imaging filters operate differently than the classes to this point in the class hierachy. Up till now, the base assumption has been that the largest possible region will be requested of the input.