Medical Imaging Interaction Toolkit  2016.11.0
Medical Imaging Interaction Toolkit
mitk::RandomForestFileIO Class Reference

#include <mitkRandomForestIO.h>

Inheritance diagram for mitk::RandomForestFileIO:
Collaboration diagram for mitk::RandomForestFileIO:

Public Member Functions

 RandomForestFileIO ()
 
 RandomForestFileIO (const mitk::RandomForestFileIO &other)
 
virtual ~RandomForestFileIO ()
 
virtual void Write ()
 Write the base data to the specified location or output stream. More...
 
virtual std::vector< itk::SmartPointer< BaseData > > Read ()
 Reads a path or stream and creates a list of BaseData objects. More...
 
virtual ConfidenceLevel GetReaderConfidenceLevel () const
 
virtual ConfidenceLevel GetWriterConfidenceLevel () const
 
- Public Member Functions inherited from mitk::AbstractFileIO
Options GetReaderOptions () const
 
us::Any GetReaderOption (const std::string &name) const
 
void SetReaderOptions (const Options &options)
 
void SetReaderOption (const std::string &name, const us::Any &value)
 
Options GetWriterOptions () const
 
us::Any GetWriterOption (const std::string &name) const
 
void SetWriterOptions (const Options &options)
 
void SetWriterOption (const std::string &name, const us::Any &value)
 
std::pair< us::ServiceRegistration< IFileReader >, us::ServiceRegistration< IFileWriter > > RegisterService (us::ModuleContext *context=us::GetModuleContext())
 
- Public Member Functions inherited from mitk::AbstractFileIOReader
virtual ConfidenceLevel GetConfidenceLevel () const override
 The confidence level of the reader or writer implementation. More...
 
- Public Member Functions inherited from mitk::AbstractFileReader
virtual void SetInput (const std::string &location) override
 Set the input location. More...
 
virtual void SetInput (const std::string &location, std::istream *is) override
 Set an input stream to read from. More...
 
virtual std::string GetInputLocation () const override
 Get the current input location. More...
 
virtual std::istream * GetInputStream () const override
 Get the input stream. More...
 
MimeType GetRegisteredMimeType () const
 
virtual DataStorage::SetOfObjects::Pointer Read (mitk::DataStorage &ds) override
 Reads the specified file or input stream, loading its contents into the provided DataStorage. More...
 
virtual Options GetOptions () const override
 returns a list of the supported options More...
 
virtual us::Any GetOption (const std::string &name) const override
 
virtual void SetOptions (const Options &options) override
 
virtual void SetOption (const std::string &name, const us::Any &value) override
 
virtual void AddProgressCallback (const ProgressCallback &callback) override
 
virtual void RemoveProgressCallback (const ProgressCallback &callback) override
 
us::ServiceRegistration< IFileReaderRegisterService (us::ModuleContext *context=us::GetModuleContext())
 
void UnregisterService ()
 
- Public Member Functions inherited from mitk::IFileReader
virtual ~IFileReader ()
 
- Public Member Functions inherited from mitk::IFileIO
virtual ~IFileIO ()
 
- Public Member Functions inherited from mitk::AbstractFileIOWriter
virtual ConfidenceLevel GetConfidenceLevel () const override
 The confidence level of the reader or writer implementation. More...
 
- Public Member Functions inherited from mitk::AbstractFileWriter
virtual void SetInput (const BaseData *data) override
 Set the input data for writing. More...
 
virtual const BaseDataGetInput () const override
 Get the input data set via SetInput(). More...
 
virtual void SetOutputLocation (const std::string &location) override
 Set the output location. More...
 
virtual std::string GetOutputLocation () const override
 Get the current output location. More...
 
virtual void SetOutputStream (const std::string &location, std::ostream *os) override
 Set an output stream for writing. More...
 
virtual std::ostream * GetOutputStream () const override
 Get the output stream. More...
 
MimeType GetRegisteredMimeType () const
 
virtual Options GetOptions () const override
 returns a list of the supported options More...
 
virtual us::Any GetOption (const std::string &name) const override
 
virtual void SetOptions (const Options &options) override
 
virtual void SetOption (const std::string &name, const us::Any &value) override
 
virtual void AddProgressCallback (const ProgressCallback &callback) override
 
virtual void RemoveProgressCallback (const ProgressCallback &callback) override
 
us::ServiceRegistration< IFileWriterRegisterService (us::ModuleContext *context=us::GetModuleContext())
 
void UnregisterService ()
 
- Public Member Functions inherited from mitk::IFileWriter
virtual ~IFileWriter ()
 

Protected Attributes

vigra::RandomForest< int > m_rf
 

Additional Inherited Members

- Public Types inherited from mitk::IFileIO
enum  ConfidenceLevel { Unsupported, PartiallySupported, Supported }
 A confidence level describing the confidence of the reader or writer in handling the given data. More...
 
typedef std::map< std::string, us::AnyOptions
 Options for reading or writing data. More...
 
typedef mitk::MessageAbstractDelegate1< float > ProgressCallback
 
- Static Public Member Functions inherited from mitk::IFileIO
static std::string PROP_DESCRIPTION ()
 Service property name for a description. More...
 
static std::string PROP_MIMETYPE ()
 Service property name for the mime-type associated with this file writer. More...
 
- Static Public Member Functions inherited from mitk::IFileWriter
static std::string PROP_BASEDATA_TYPE ()
 Service property name for the supported mitk::BaseData sub-class. More...
 
- Protected Member Functions inherited from mitk::AbstractFileIO
 AbstractFileIO (const AbstractFileIO &other)
 
 AbstractFileIO (const std::string &baseDataType)
 
 AbstractFileIO (const std::string &baseDataType, const CustomMimeType &mimeType, const std::string &description)
 
void SetMimeType (const CustomMimeType &mimeType)
 
const CustomMimeTypeGetMimeType () const
 
void SetReaderDescription (const std::string &description)
 
std::string GetReaderDescription () const
 
void SetWriterDescription (const std::string &description)
 
std::string GetWriterDescription () const
 
void SetDefaultReaderOptions (const Options &defaultOptions)
 
Options GetDefaultReaderOptions () const
 
void SetDefaultWriterOptions (const Options &defaultOptions)
 
Options GetDefaultWriterOptions () const
 
void SetReaderRanking (int ranking)
 Set the service ranking for this file reader. More...
 
int GetReaderRanking () const
 
void SetWriterRanking (int ranking)
 
int GetWriterRanking () const
 
- Protected Member Functions inherited from mitk::AbstractFileIOReader
 AbstractFileIOReader ()
 
 AbstractFileIOReader (const CustomMimeType &mimeType, const std::string &description)
 
- Protected Member Functions inherited from mitk::AbstractFileReader
 AbstractFileReader ()
 
 ~AbstractFileReader ()
 
 AbstractFileReader (const AbstractFileReader &other)
 
 AbstractFileReader (const CustomMimeType &mimeType, const std::string &description)
 
virtual us::ServiceProperties GetServiceProperties () const
 
virtual us::ServiceRegistration< CustomMimeTypeRegisterMimeType (us::ModuleContext *context)
 
void SetMimeType (const CustomMimeType &mimeType)
 
const CustomMimeTypeGetMimeType () const
 
void SetMimeTypePrefix (const std::string &prefix)
 
std::string GetMimeTypePrefix () const
 
void SetDescription (const std::string &description)
 
std::string GetDescription () const
 
void SetDefaultOptions (const Options &defaultOptions)
 
Options GetDefaultOptions () const
 
void SetRanking (int ranking)
 Set the service ranking for this file reader. More...
 
int GetRanking () const
 
std::string GetLocalFileName () const
 Get a local file name for reading. More...
 
virtual void SetDefaultDataNodeProperties (DataNode *node, const std::string &filePath)
 
- Protected Member Functions inherited from mitk::AbstractFileIOWriter
 AbstractFileIOWriter (const std::string &baseDataType)
 
 AbstractFileIOWriter (const std::string &baseDataType, const CustomMimeType &mimeType, const std::string &description)
 
- Protected Member Functions inherited from mitk::AbstractFileWriter
 ~AbstractFileWriter ()
 
 AbstractFileWriter (const AbstractFileWriter &other)
 
 AbstractFileWriter (const std::string &baseDataType)
 
 AbstractFileWriter (const std::string &baseDataType, const CustomMimeType &mimeType, const std::string &description)
 
virtual us::ServiceProperties GetServiceProperties () const
 
virtual us::ServiceRegistration< CustomMimeTypeRegisterMimeType (us::ModuleContext *context)
 
void SetMimeType (const CustomMimeType &mimeType)
 
const CustomMimeTypeGetMimeType () const
 
void SetMimeTypePrefix (const std::string &prefix)
 
std::string GetMimeTypePrefix () const
 
void SetDescription (const std::string &description)
 Sets a human readable description of this writer. More...
 
std::string GetDescription () const
 
void SetDefaultOptions (const Options &defaultOptions)
 
Options GetDefaultOptions () const
 
void SetRanking (int ranking)
 Set the service ranking for this file writer. More...
 
int GetRanking () const
 
void SetBaseDataType (const std::string &baseDataType)
 Sets the name of the mitk::Basedata that this writer is able to handle. More...
 
virtual std::string GetBaseDataType () const
 
void ValidateOutputLocation () const
 

Detailed Description

Writes vigra based mitk::DecisionForest

Definition at line 30 of file mitkRandomForestIO.h.

Constructor & Destructor Documentation

mitk::RandomForestFileIO::RandomForestFileIO ( const mitk::RandomForestFileIO other)

Definition at line 76 of file mitkRandomForestIO.cpp.

mitk::RandomForestFileIO::~RandomForestFileIO ( )
virtual

Definition at line 81 of file mitkRandomForestIO.cpp.

Member Function Documentation

mitk::RandomForestFileIO::ConfidenceLevel mitk::RandomForestFileIO::GetWriterConfidenceLevel ( ) const
virtual

Reimplemented from mitk::AbstractFileIO.

Definition at line 43 of file mitkRandomForestIO.cpp.

References mitk::IFileIO::Supported, and mitk::IFileIO::Unsupported.

std::vector< itk::SmartPointer< mitk::BaseData > > mitk::RandomForestFileIO::Read ( )
virtual

Reads a path or stream and creates a list of BaseData objects.

This method must be implemented for each specific reader. Call GetInputStream() first and check for a non-null stream to read from. If the input stream is NULL, use GetInputLocation() to read from a local file-system path.

If the reader cannot use streams directly, use GetLocalFileName() instead.

Returns
The created BaseData objects.
Exceptions
mitk::Exception
See also
GetLocalFileName()
IFileReader::Read()

Implements mitk::AbstractFileReader.

Definition at line 86 of file mitkRandomForestIO.cpp.

References MITK_ERROR, MITK_INFO, and mitk::New().

void mitk::RandomForestFileIO::Write ( )
virtual

Write the base data to the specified location or output stream.

This method must be implemented for each specific writer. Call GetOutputStream() first and check for a non-null stream to write to. If the output stream is NULL, use GetOutputLocation() to write to a local file-system path.

If the reader cannot use streams directly, use GetLocalFile() to retrieve a temporary local file name instead.

Exceptions
mitk::Exception
See also
GetLocalFile()
IFileWriter::Write()

Implements mitk::AbstractFileWriter.

Definition at line 160 of file mitkRandomForestIO.cpp.

References MITK_ERROR, and MITK_INFO.

Member Data Documentation

vigra::RandomForest<int> mitk::RandomForestFileIO::m_rf
mutableprotected

Definition at line 50 of file mitkRandomForestIO.h.

Referenced by GetReaderConfidenceLevel().


The documentation for this class was generated from the following files: