Gantry tilt analysis result. More...

#include <mitkGantryTiltInformation.h>

Public Types
typedef itk::Point< double, 3 >	Point3Dd

typedef itk::Vector< double, 3 >	Vector3Dd

Public Member Functions
	GantryTiltInformation ()
	Just so we can create empty instances for assigning results later. More...

void	Print (std::ostream &os) const

	GantryTiltInformation (const Point3D &origin1, const Point3D &origin2, const Vector3D &right, const Vector3D &up, unsigned int numberOfSlicesApart)
	THE constructor, which does all the calculations. More...

bool	IsSheared () const
	Whether the slices were sheared. More...

bool	IsRegularGantryTilt () const
	Whether the shearing is a gantry tilt or more complicated. More...

double	GetMatrixCoefficientForCorrectionInWorldCoordinates () const
	The offset distance in Y direction for each slice in mm (describes the tilt result). More...

double	GetRealZSpacing () const
	The z / inter-slice spacing. Needed to correct ImageSeriesReader's result. More...

double	GetTiltCorrectedAdditionalSize (unsigned int imageSizeZ) const
	The shift between first and last slice in mm. More...

double	GetTiltAngleInDegrees () const
	Calculated tilt angle in degrees. More...

Static Public Member Functions
static GantryTiltInformation	MakeFromTagValues (const std::string &origin1String, const std::string &origin2String, const std::string orientationString, unsigned int numberOfSlicesApart)
	Factory method to create GantryTiltInformation from tag values (strings). More...

Detailed Description

Gantry tilt analysis result.

Takes geometry information for two slices of a DICOM series and calculates whether these fit into an orthogonal block or not. If NOT, they can either be the result of an acquisition with gantry tilt OR completly broken by some shearing transformation.

Most calculations are done in the constructor, results can then be read via the remaining methods.

This class is a helper to DICOMITKSeriesGDCMReader and can not be used outside of The DICOMReader Module

Definition at line 42 of file mitkGantryTiltInformation.h.

Member Typedef Documentation

typedef itk::Point<double,3> mitk::GantryTiltInformation::Point3Dd

Definition at line 47 of file mitkGantryTiltInformation.h.

typedef itk::Vector<double,3> mitk::GantryTiltInformation::Vector3Dd

Definition at line 48 of file mitkGantryTiltInformation.h.

Constructor & Destructor Documentation

mitk::GantryTiltInformation::GantryTiltInformation ( )

Just so we can create empty instances for assigning results later.

Definition at line 25 of file mitkGantryTiltInformation.cpp.

mitk::GantryTiltInformation::GantryTiltInformation	(	const Point3D &	origin1,
		const Point3D &	origin2,
		const Vector3D &	right,
		const Vector3D &	up,
		unsigned int	numberOfSlicesApart
	)

THE constructor, which does all the calculations.

Determining the amount of tilt is done by checking the distances of origin1 from planes through origin2. Two planes are considered:

normal vector along normal of slices (right x up): gives the slice distance
normal vector along orientation vector "up": gives the shift parallel to the plane orientation

The tilt angle can then be calculated from these distances

Parameters

origin1	origin of the first slice
origin2	origin of the second slice
right	right/up describe the orientatation of borth slices
up	right/up describe the orientatation of borth slices
numberOfSlicesApart	how many slices are the given origins apart (1 for neighboring slices)

Definition at line 48 of file mitkGantryTiltInformation.cpp.

References doublepoint, doublevector, and MITK_DEBUG.

Member Function Documentation

double mitk::GantryTiltInformation::GetMatrixCoefficientForCorrectionInWorldCoordinates ( ) const

The offset distance in Y direction for each slice in mm (describes the tilt result).

Definition at line 229 of file mitkGantryTiltInformation.cpp.

double mitk::GantryTiltInformation::GetRealZSpacing ( ) const

The z / inter-slice spacing. Needed to correct ImageSeriesReader's result.

Definition at line 236 of file mitkGantryTiltInformation.cpp.

double mitk::GantryTiltInformation::GetTiltAngleInDegrees ( ) const

Calculated tilt angle in degrees.

Definition at line 223 of file mitkGantryTiltInformation.cpp.

double mitk::GantryTiltInformation::GetTiltCorrectedAdditionalSize ( unsigned int imageSizeZ ) const

The shift between first and last slice in mm.

Needed to resize an orthogonal image volume.

Definition at line 217 of file mitkGantryTiltInformation.cpp.

bool mitk::GantryTiltInformation::IsRegularGantryTilt ( ) const

Whether the shearing is a gantry tilt or more complicated.

Gantry tilt will only produce shifts in ONE orientation, not in both.

Since the correction code currently only coveres one tilt direction AND we don't know of medical images with two tilt directions, the loading code wants to check if our assumptions are true.

Definition at line 252 of file mitkGantryTiltInformation.cpp.

Referenced by mitk::EquiDistantBlocksSorter::AnalyzeFileForITKImageSeriesReaderSpacingAssumption(), mitk::ThreeDnTDICOMSeriesReader::LoadMitkImageForImageBlockDescriptor(), and mitk::DICOMITKSeriesGDCMReader::LoadMitkImageForImageBlockDescriptor().

bool mitk::GantryTiltInformation::IsSheared ( ) const

Whether the slices were sheared.

True if any of the shifts along right or up vector are non-zero.

Definition at line 243 of file mitkGantryTiltInformation.cpp.

Referenced by mitk::EquiDistantBlocksSorter::AnalyzeFileForITKImageSeriesReaderSpacingAssumption().

mitk::GantryTiltInformation mitk::GantryTiltInformation::MakeFromTagValues	(	const std::string &	origin1String,
		const std::string &	origin2String,
		const std::string	orientationString,
		unsigned int	numberOfSlicesApart
	)

static

Factory method to create GantryTiltInformation from tag values (strings).

Parameters as the regular c'tor.

Definition at line 150 of file mitkGantryTiltInformation.cpp.

References mitk::DICOMStringToOrientationVectors(), and mitk::DICOMStringToPoint3D().

Referenced by mitk::EquiDistantBlocksSorter::AnalyzeFileForITKImageSeriesReaderSpacingAssumption(), and mitk::NormalDirectionConsistencySorter::Sort().

void mitk::GantryTiltInformation::Print ( std::ostream & os ) const

Definition at line 187 of file mitkGantryTiltInformation.cpp.

The documentation for this class was generated from the following files:

Public Types

Public Member Functions

Static Public Member Functions

Detailed Description

Member Typedef Documentation

Constructor & Destructor Documentation

Member Function Documentation