Medical Imaging Interaction Toolkit  2016.11.0
Medical Imaging Interaction Toolkit
mitk::GIFCooccurenceMatrix Class Reference

#include <mitkGIFCooccurenceMatrix.h>

Inheritance diagram for mitk::GIFCooccurenceMatrix:
Collaboration diagram for mitk::GIFCooccurenceMatrix:

Classes

struct  GIFCooccurenceMatrixConfiguration
 

Public Member Functions

 mitkClassMacro (GIFCooccurenceMatrix, AbstractGlobalImageFeature) static Pointer New()
 
Pointer Clone () const
 
 GIFCooccurenceMatrix ()
 
virtual FeatureListType CalculateFeatures (const Image::Pointer &image, const Image::Pointer &feature) override
 Calculates the Cooccurence-Matrix based features for this class. More...
 
virtual FeatureNameListType GetFeatureNames () override
 Returns a list of the names of all features that are calculated from this class. More...
 
virtual double GetRange () const
 
virtual void SetRange (double _arg)
 
virtual unsigned int GetDirection () const
 
virtual void SetDirection (unsigned int _arg)
 
- Public Member Functions inherited from mitk::AbstractGlobalImageFeature
virtual void SetRequestedRegionToLargestPossibleRegion () override
 Set the RequestedRegion to the LargestPossibleRegion. More...
 
virtual bool RequestedRegionIsOutsideOfTheBufferedRegion () override
 Determine whether the RequestedRegion is outside of the BufferedRegion. More...
 
virtual bool VerifyRequestedRegion () override
 Verify that the RequestedRegion is within the LargestPossibleRegion. More...
 
virtual void SetRequestedRegion (const itk::DataObject *) override
 Set the requested region from this data object to match the requested region of the data object passed in as a parameter. More...
 
virtual bool IsEmpty () const override
 Check whether object contains data (at least at one point in time), e.g., a set of points may be empty. More...
 
- Public Member Functions inherited from mitk::BaseData
virtual std::vector< std::string > GetClassHierarchy () const
 
virtual const char * GetClassName () const
 
const mitk::TimeGeometryGetTimeGeometry () const
 Return the TimeGeometry of the data as const pointer. More...
 
const mitk::TimeGeometryGetTimeSlicedGeometry () const
 Return the TimeGeometry of the data as const pointer. More...
 
mitk::TimeGeometryGetTimeGeometry ()
 Return the TimeGeometry of the data as pointer. More...
 
const mitk::TimeGeometryGetUpdatedTimeGeometry ()
 Return the TimeGeometry of the data. More...
 
const mitk::TimeGeometryGetUpdatedTimeSliceGeometry ()
 Return the TimeGeometry of the data. More...
 
virtual void Expand (unsigned int timeSteps)
 Expands the TimeGeometry to a number of TimeSteps. More...
 
const mitk::BaseGeometryGetUpdatedGeometry (int t=0)
 Return the BaseGeometry of the data at time t. More...
 
mitk::BaseGeometryGetGeometry (int t=0) const
 Return the geometry, which is a TimeGeometry, of the data as non-const pointer. More...
 
void UpdateOutputInformation () override
 Update the information for this BaseData (the geometry in particular) so that it can be used as an output of a BaseProcess. More...
 
void CopyInformation (const itk::DataObject *data) override
 Copy information from the specified data set. More...
 
virtual bool IsInitialized () const
 Check whether the data has been initialized, i.e., at least the Geometry and other header data has been set. More...
 
virtual void Clear ()
 Calls ClearData() and InitializeEmpty();. More...
 
virtual bool IsEmptyTimeStep (unsigned int t) const
 Check whether object contains data (at a specified time), e.g., a set of points may be empty. More...
 
void ExecuteOperation (Operation *operation) override
 overwrite if the Data can be called by an Interactor (StateMachine). More...
 
virtual void SetGeometry (BaseGeometry *aGeometry3D)
 Set the BaseGeometry of the data, which will be referenced (not copied!). Assumes the data object has only 1 time step ( is a 3D object ) and creates a new TimeGeometry which saves the given BaseGeometry. If an TimeGeometry has already been set for the object, it will be replaced after calling this function. More...
 
virtual void SetTimeGeometry (TimeGeometry *geometry)
 Set the TimeGeometry of the data, which will be referenced (not copied!). More...
 
virtual void SetClonedGeometry (const BaseGeometry *aGeometry3D)
 Set a clone of the provided TimeGeometry as TimeGeometry of the data. Assumes the data object has only 1 time step ( is a 3D object ) and creates a new TimeGeometry. If an TimeGeometry has already been set for the object, it will be replaced after calling this function. More...
 
virtual void SetClonedTimeGeometry (const TimeGeometry *geometry)
 Set a clone of the provided TimeGeometry as TimeGeometry of the data. More...
 
virtual void SetClonedGeometry (const BaseGeometry *aGeometry3D, unsigned int time)
 Set a clone of the provided geometry as BaseGeometry of a given time step. More...
 
mitk::PropertyList::Pointer GetPropertyList () const
 Get the data's property list. More...
 
void SetPropertyList (PropertyList *propertyList)
 Set the data's property list. More...
 
mitk::BaseProperty::Pointer GetProperty (const char *propertyKey) const
 Get the property (instance of BaseProperty) with key propertyKey from the PropertyList, and set it to this, respectively;. More...
 
void SetProperty (const char *propertyKey, BaseProperty *property)
 
virtual void SetOrigin (const Point3D &origin)
 Convenience method for setting the origin of the BaseGeometry instances of all time steps. More...
 
itk::SmartPointer< mitk::BaseDataSourceGetSource () const
 Get the process object that generated this data object. More...
 
unsigned int GetTimeSteps () const
 Get the number of time steps from the TimeGeometry As the base data has not a data vector given by itself, the number of time steps is defined over the time sliced geometry. In sub classes, a better implementation could be over the length of the data vector. More...
 
virtual unsigned long GetMTime () const override
 Get the modified time of the last change of the contents this data object or its geometry. More...
 
virtual void Graft (const DataObject *) override
 
- Public Member Functions inherited from mitk::OperationActor
 itkTypeMacroNoParent (OperationActor) virtual ~OperationActor()
 

Additional Inherited Members

- Public Types inherited from mitk::AbstractGlobalImageFeature
typedef std::vector< std::pair< std::string, double > > FeatureListType
 
typedef std::vector< std::string > FeatureNameListType
 
- Public Types inherited from mitk::BaseData
typedef BaseData Self
 
typedef itk::DataObject Superclass
 
typedef itk::SmartPointer< SelfPointer
 
typedef itk::SmartPointer< const SelfConstPointer
 
- Static Public Member Functions inherited from mitk::BaseData
static const char * GetStaticNameOfClass ()
 
- Protected Member Functions inherited from mitk::BaseData
 BaseData ()
 
 BaseData (const BaseData &other)
 
 ~BaseData ()
 
virtual void InitializeTimeGeometry (unsigned int timeSteps=1)
 Initialize the TimeGeometry for a number of time steps. The TimeGeometry is initialized empty and evenly timed. In many cases it will be necessary to overwrite this in sub-classes. More...
 
virtual void InitializeTimeSlicedGeometry (unsigned int timeSteps=1)
 Initialize the TimeGeometry for a number of time steps. The TimeGeometry is initialized empty and evenly timed. In many cases it will be necessary to overwrite this in sub-classes. More...
 
virtual void ClearData ()
 reset to non-initialized state, release memory More...
 
virtual void InitializeEmpty ()
 Pure virtual; Must be used in subclasses to get a data object to a valid state. Should at least create one empty object and call Superclass::InitializeTimeGeometry() to ensure an existing valid geometry. More...
 
virtual void PrintSelf (std::ostream &os, itk::Indent indent) const override
 
- Protected Attributes inherited from mitk::BaseData
bool m_LastRequestedRegionWasOutsideOfTheBufferedRegion
 
unsigned int m_SourceOutputIndexDuplicate
 
bool m_Initialized
 

Detailed Description

Definition at line 11 of file mitkGIFCooccurenceMatrix.h.

Constructor & Destructor Documentation

mitk::GIFCooccurenceMatrix::GIFCooccurenceMatrix ( )

Definition at line 219 of file mitkGIFCooccurenceMatrix.cpp.

Member Function Documentation

mitk::GIFCooccurenceMatrix::FeatureListType mitk::GIFCooccurenceMatrix::CalculateFeatures ( const Image::Pointer image,
const Image::Pointer feature 
)
overridevirtual
Pointer mitk::GIFCooccurenceMatrix::Clone ( ) const
virtual unsigned int mitk::GIFCooccurenceMatrix::GetDirection ( ) const
virtual
mitk::GIFCooccurenceMatrix::FeatureNameListType mitk::GIFCooccurenceMatrix::GetFeatureNames ( )
overridevirtual

Returns a list of the names of all features that are calculated from this class.

Implements mitk::AbstractGlobalImageFeature.

Definition at line 237 of file mitkGIFCooccurenceMatrix.cpp.

virtual double mitk::GIFCooccurenceMatrix::GetRange ( ) const
virtual
mitk::GIFCooccurenceMatrix::mitkClassMacro ( GIFCooccurenceMatrix  ,
AbstractGlobalImageFeature   
)
virtual void mitk::GIFCooccurenceMatrix::SetDirection ( unsigned int  _arg)
virtual
virtual void mitk::GIFCooccurenceMatrix::SetRange ( double  _arg)
virtual

The documentation for this class was generated from the following files: