Medical Imaging Interaction Toolkit  2016.11.0
Medical Imaging Interaction Toolkit
mitk::ExtractDirectedPlaneImageFilterNew Class Reference

A filter that can extract a 2D slice from a 3D or 4D image especially if the image`s axes are rotated. More...

#include <mitkExtractDirectedPlaneImageFilterNew.h>

Inheritance diagram for mitk::ExtractDirectedPlaneImageFilterNew:
Collaboration diagram for mitk::ExtractDirectedPlaneImageFilterNew:

Public Member Functions

 mitkClassMacro (ExtractDirectedPlaneImageFilterNew, ImageToImageFilter)
 
Pointer Clone () const
 
virtual void SetCurrentWorldPlaneGeometry (BaseGeometry *_arg)
 Set macro for the current worldgeometry. More...
 
void SetCurrentWorldGeometry2D (BaseGeometry *geo)
 
virtual void SetImageGeometry (BaseGeometry *_arg)
 
virtual void SetActualInputTimestep (int _arg)
 Set macro for the current timestep. More...
 
- Public Member Functions inherited from mitk::ImageToImageFilter
virtual std::vector< std::string > GetClassHierarchy () const override
 
virtual const char * GetClassName () const
 
Pointer Clone () const
 
virtual void SetInput (const InputImageType *image)
 
virtual void SetInput (unsigned int, const InputImageType *image)
 
InputImageTypeGetInput (void)
 
InputImageTypeGetInput (unsigned int idx)
 
const InputImageTypeGetInput (void) const
 
const InputImageTypeGetInput (unsigned int idx) const
 
- Public Member Functions inherited from mitk::ImageSource
Pointer Clone () const
 
OutputTypeGetOutput ()
 Get the output data of this image source object. More...
 
const OutputTypeGetOutput () const
 
OutputTypeGetOutput (DataObjectPointerArraySizeType idx)
 
const OutputTypeGetOutput (DataObjectPointerArraySizeType idx) const
 
virtual itk::DataObject::Pointer MakeOutput (DataObjectPointerArraySizeType idx) override
 Make a DataObject of the correct type to used as the specified output. More...
 
virtual itk::DataObject::Pointer MakeOutput (const DataObjectIdentifierType &name) override
 
virtual vtkImageData * GetVtkImageData ()
 
virtual const vtkImageData * GetVtkImageData () const
 
- Public Member Functions inherited from mitk::BaseDataSource
OutputTypeGetOutput ()
 
const OutputTypeGetOutput () const
 
OutputTypeGetOutput (DataObjectPointerArraySizeType idx)
 
const OutputTypeGetOutput (DataObjectPointerArraySizeType idx) const
 
virtual void GraftOutput (OutputType *output)
 Graft the specified BaseData onto this BaseDataSource's output. More...
 
virtual void GraftOutput (const DataObjectIdentifierType &key, OutputType *output)
 
virtual void GraftNthOutput (unsigned int idx, OutputType *output)
 Graft the specified base data object onto this BaseDataSource's idx'th output. More...
 
bool Updating () const
 Access itk::ProcessObject::m_Updating. More...
 

Static Public Member Functions

static Pointer New ()
 
- Static Public Member Functions inherited from mitk::ImageToImageFilter
static const char * GetStaticNameOfClass ()
 
static Pointer New ()
 
- Static Public Member Functions inherited from mitk::ImageSource
static const char * GetStaticNameOfClass ()
 
static Pointer New ()
 Method for creation through the object factory. More...
 
- Static Public Member Functions inherited from mitk::BaseDataSource
static const char * GetStaticNameOfClass ()
 

Protected Member Functions

 ExtractDirectedPlaneImageFilterNew ()
 
virtual ~ExtractDirectedPlaneImageFilterNew ()
 
virtual void GenerateData () override
 A version of GenerateData() specific for image processing filters. More...
 
virtual void GenerateOutputInformation () override
 
- Protected Member Functions inherited from mitk::ImageToImageFilter
 ImageToImageFilter ()
 
virtual ~ImageToImageFilter ()
 
virtual void PrintSelf (std::ostream &os, itk::Indent indent) const override
 
virtual void GenerateInputRequestedRegion () override
 
- Protected Member Functions inherited from mitk::ImageSource
 ImageSource ()
 
virtual ~ImageSource ()
 
virtual void ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, itk::ThreadIdType threadId)
 If an imaging filter can be implemented as a multithreaded algorithm, the filter will provide an implementation of ThreadedGenerateData(). More...
 
virtual void PrepareOutputs () override
 This method is intentionally left blank. More...
 
virtual void AllocateOutputs ()
 The GenerateData method normally allocates the buffers for all of the outputs of a filter. More...
 
virtual void BeforeThreadedGenerateData ()
 If an imaging filter needs to perform processing after the buffer has been allocated but before threads are spawned, the filter can can provide an implementation for BeforeThreadedGenerateData(). More...
 
virtual void AfterThreadedGenerateData ()
 If an imaging filter needs to perform processing after all processing threads have completed, the filter can can provide an implementation for AfterThreadedGenerateData(). More...
 
virtual unsigned int SplitRequestedRegion (unsigned int i, unsigned int num, OutputImageRegionType &splitRegion)
 Split the output's RequestedRegion into "num" pieces, returning region "i" as "splitRegion". More...
 
- Protected Member Functions inherited from mitk::BaseDataSource
 BaseDataSource ()
 
virtual ~BaseDataSource ()
 

Additional Inherited Members

- Public Types inherited from mitk::ImageToImageFilter
typedef ImageToImageFilter Self
 
typedef ImageSource Superclass
 
typedef itk::SmartPointer< SelfPointer
 
typedef itk::SmartPointer< const SelfConstPointer
 
typedef Superclass::OutputImageRegionType OutputImageRegionType
 
typedef mitk::Image InputImageType
 
typedef InputImageType::Pointer InputImagePointer
 
typedef InputImageType::ConstPointer InputImageConstPointer
 
typedef SlicedData::RegionType InputImageRegionType
 
- Public Types inherited from mitk::ImageSource
typedef ImageSource Self
 
typedef BaseDataSource Superclass
 
typedef itk::SmartPointer< SelfPointer
 
typedef itk::SmartPointer< const SelfConstPointer
 
typedef mitk::Image OutputImageType
 Some convenient typedefs. More...
 
typedef OutputImageType OutputType
 
typedef OutputImageType::Pointer OutputImagePointer
 
typedef SlicedData::RegionType OutputImageRegionType
 
- Public Types inherited from mitk::BaseDataSource
typedef BaseDataSource Self
 
typedef itk::ProcessObject Superclass
 
typedef itk::SmartPointer< SelfPointer
 
typedef itk::SmartPointer< const SelfConstPointer
 
typedef BaseData OutputType
 
typedef itk::DataObject::DataObjectIdentifierType DataObjectIdentifierType
 
- Static Protected Member Functions inherited from mitk::ImageSource
static ITK_THREAD_RETURN_TYPE ThreaderCallback (void *arg)
 Static function used as a "callback" by the MultiThreader. More...
 
- Static Protected Member Functions inherited from mitk::BaseDataSource
static Pointer New ()
 

Detailed Description

A filter that can extract a 2D slice from a 3D or 4D image especially if the image`s axes are rotated.

Deprecated:
This class is deprecated. Use mitk::ExtractSliceFilter instead.
See also
ExtractSliceFilter
See also
ContourTool
SegTool2D
ExtractImageFilter
OverwriteSliceImageFilter
OverwriteDirectedPlaneImageFilter

There is a separate page describing the general design of QmitkInteractiveSegmentation: Technical design of QmitkSegmentation

This class takes an 3D or 4D mitk::Image as input and extracts a slice from it. If you work with a 4D image as input you have to specify the desired timestep at which the slice shall be extracted, otherwise the lowest given timestep is selected by default.

The special feature of this filter is, that the planes of the input image can be rotated in any way. To assure a proper extraction you have to set the currentWorldPlaneGeometry with you can obtain from the BaseRenderer, respectively the positionEvent send by the renderer.

The output will not be set if there was a problem with the input image

Author
fetzer

Definition at line 58 of file mitkExtractDirectedPlaneImageFilterNew.h.

Constructor & Destructor Documentation

mitk::ExtractDirectedPlaneImageFilterNew::ExtractDirectedPlaneImageFilterNew ( )
protected

Definition at line 24 of file mitkExtractDirectedPlaneImageFilterNew.cpp.

References MITK_WARN.

mitk::ExtractDirectedPlaneImageFilterNew::~ExtractDirectedPlaneImageFilterNew ( )
protectedvirtual

Definition at line 30 of file mitkExtractDirectedPlaneImageFilterNew.cpp.

Member Function Documentation

Pointer mitk::ExtractDirectedPlaneImageFilterNew::Clone ( ) const
void mitk::ExtractDirectedPlaneImageFilterNew::GenerateData ( )
overrideprotectedvirtual

A version of GenerateData() specific for image processing filters.

This implementation will split the processing across multiple threads. The buffer is allocated by this method. Then the BeforeThreadedGenerateData() method is called (if provided). Then, a series of threads are spawned each calling ThreadedGenerateData(). After all the threads have completed processing, the AfterThreadedGenerateData() method is called (if provided). If an image processing filter cannot be threaded, the filter should provide an implementation of GenerateData(). That implementation is responsible for allocating the output buffer. If a filter an be threaded, it should NOT provide a GenerateData() method but should provide a ThreadedGenerateData() instead.

See also
ThreadedGenerateData()

Reimplemented from mitk::ImageSource.

Definition at line 34 of file mitkExtractDirectedPlaneImageFilterNew.cpp.

References AccessFixedDimensionByItk, mitk::ImageToImageFilter::GetInput(), mitk::ImageSource::GetOutput(), MITK_ERROR, and mitk::ImageTimeSelector::New().

void mitk::ExtractDirectedPlaneImageFilterNew::GenerateOutputInformation ( void  )
overrideprotectedvirtual

Definition at line 83 of file mitkExtractDirectedPlaneImageFilterNew.cpp.

mitk::ExtractDirectedPlaneImageFilterNew::mitkClassMacro ( ExtractDirectedPlaneImageFilterNew  ,
ImageToImageFilter   
)
static Pointer mitk::ExtractDirectedPlaneImageFilterNew::New ( )
static
virtual void mitk::ExtractDirectedPlaneImageFilterNew::SetActualInputTimestep ( int  _arg)
virtual

Set macro for the current timestep.

Parameter The timestep of the image from which the slice shall be extracted

void mitk::ExtractDirectedPlaneImageFilterNew::SetCurrentWorldGeometry2D ( BaseGeometry geo)
inline
Deprecated:
(as of 2014_10) Please use SetCurrentWorldPlaneGeometry

Definition at line 75 of file mitkExtractDirectedPlaneImageFilterNew.h.

virtual void mitk::ExtractDirectedPlaneImageFilterNew::SetCurrentWorldPlaneGeometry ( BaseGeometry _arg)
virtual

Set macro for the current worldgeometry.

Parameter The current wordgeometry that describes the position (rotation, translation) of the plane (and therefore the slice to be extracted) in our 3D(+t) image

virtual void mitk::ExtractDirectedPlaneImageFilterNew::SetImageGeometry ( BaseGeometry _arg)
virtual

The documentation for this class was generated from the following files: