Extracts a 2D slice of arbitrary geometry from a 3D or 4D image. More...

#include <mitkExtractDirectedPlaneImageFilter.h>

Inheritance diagram for mitk::ExtractDirectedPlaneImageFilter:

Collaboration diagram for mitk::ExtractDirectedPlaneImageFilter:

Public Member Functions
	mitkClassMacro (ExtractDirectedPlaneImageFilter, ImageToImageFilter)

Pointer	Clone () const

virtual void	SetWorldGeometry (PlaneGeometry *_arg)

virtual vtkImageReslice *	GetReslicer ()

virtual void	SetTargetTimestep (unsigned int _arg)

virtual unsigned int	GetTargetTimestep ()

virtual void	SetInPlaneResampleExtentByGeometry (bool _arg)

virtual bool	GetInPlaneResampleExtentByGeometry ()

virtual void	SetResliceInterpolationProperty (VtkResliceInterpolationProperty *_arg)

virtual VtkResliceInterpolationProperty *	GetResliceInterpolationProperty ()

virtual void	SetIsMapperMode (bool _arg)

virtual bool	GetIsMapperMode ()

Public Member Functions inherited from mitk::ImageToImageFilter
virtual std::vector< std::string >	GetClassHierarchy () const override

virtual const char *	GetClassName () const

Pointer	Clone () const

virtual void	SetInput (const InputImageType *image)

virtual void	SetInput (unsigned int, const InputImageType *image)

InputImageType *	GetInput (void)

InputImageType *	GetInput (unsigned int idx)

const InputImageType *	GetInput (void) const

const InputImageType *	GetInput (unsigned int idx) const

Public Member Functions inherited from mitk::ImageSource
Pointer	Clone () const

OutputType *	GetOutput ()
	Get the output data of this image source object. More...

const OutputType *	GetOutput () const

OutputType *	GetOutput (DataObjectPointerArraySizeType idx)

const OutputType *	GetOutput (DataObjectPointerArraySizeType idx) const

virtual itk::DataObject::Pointer	MakeOutput (DataObjectPointerArraySizeType idx) override
	Make a DataObject of the correct type to used as the specified output. More...

virtual itk::DataObject::Pointer	MakeOutput (const DataObjectIdentifierType &name) override

virtual vtkImageData *	GetVtkImageData ()

virtual const vtkImageData *	GetVtkImageData () const

Public Member Functions inherited from mitk::BaseDataSource
OutputType *	GetOutput ()

const OutputType *	GetOutput () const

OutputType *	GetOutput (DataObjectPointerArraySizeType idx)

const OutputType *	GetOutput (DataObjectPointerArraySizeType idx) const

virtual void	GraftOutput (OutputType *output)
	Graft the specified BaseData onto this BaseDataSource's output. More...

virtual void	GraftOutput (const DataObjectIdentifierType &key, OutputType *output)

virtual void	GraftNthOutput (unsigned int idx, OutputType *output)
	Graft the specified base data object onto this BaseDataSource's idx'th output. More...

bool	Updating () const
	Access itk::ProcessObject::m_Updating. More...

Static Public Member Functions
static Pointer	New ()

Static Public Member Functions inherited from mitk::ImageToImageFilter
static const char *	GetStaticNameOfClass ()

static Pointer	New ()

Static Public Member Functions inherited from mitk::ImageSource
static const char *	GetStaticNameOfClass ()

static Pointer	New ()
	Method for creation through the object factory. More...

Static Public Member Functions inherited from mitk::BaseDataSource
static const char *	GetStaticNameOfClass ()

Protected Member Functions
	ExtractDirectedPlaneImageFilter ()

virtual	~ExtractDirectedPlaneImageFilter ()

virtual void	GenerateData () override
	A version of GenerateData() specific for image processing filters. More...

virtual void	GenerateOutputInformation () override

bool	CalculateClippedPlaneBounds (const BaseGeometry boundingGeometry, const PlaneGeometry planeGeometry, double *bounds)

bool	LineIntersectZero (vtkPoints points, int p1, int p2, double bounds)

Protected Member Functions inherited from mitk::ImageToImageFilter
	ImageToImageFilter ()

virtual	~ImageToImageFilter ()

virtual void	PrintSelf (std::ostream &os, itk::Indent indent) const override

virtual void	GenerateInputRequestedRegion () override

Protected Member Functions inherited from mitk::ImageSource
	ImageSource ()

virtual	~ImageSource ()

virtual void	ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, itk::ThreadIdType threadId)
	If an imaging filter can be implemented as a multithreaded algorithm, the filter will provide an implementation of ThreadedGenerateData(). More...

virtual void	PrepareOutputs () override
	This method is intentionally left blank. More...

virtual void	AllocateOutputs ()
	The GenerateData method normally allocates the buffers for all of the outputs of a filter. More...

virtual void	BeforeThreadedGenerateData ()
	If an imaging filter needs to perform processing after the buffer has been allocated but before threads are spawned, the filter can can provide an implementation for BeforeThreadedGenerateData(). More...

virtual void	AfterThreadedGenerateData ()
	If an imaging filter needs to perform processing after all processing threads have completed, the filter can can provide an implementation for AfterThreadedGenerateData(). More...

virtual unsigned int	SplitRequestedRegion (unsigned int i, unsigned int num, OutputImageRegionType &splitRegion)
	Split the output's RequestedRegion into "num" pieces, returning region "i" as "splitRegion". More...

Protected Member Functions inherited from mitk::BaseDataSource
	BaseDataSource ()

virtual	~BaseDataSource ()

Protected Attributes
const PlaneGeometry *	m_WorldGeometry

vtkImageReslice *	m_Reslicer

unsigned int	m_TargetTimestep

bool	m_InPlaneResampleExtentByGeometry

int	m_ThickSlicesMode

int	m_ThickSlicesNum

bool	m_IsMapperMode

VtkResliceInterpolationProperty *	m_ResliceInterpolationProperty

Additional Inherited Members
Public Types inherited from mitk::ImageToImageFilter
typedef ImageToImageFilter	Self

typedef ImageSource	Superclass

typedef itk::SmartPointer< Self >	Pointer

typedef itk::SmartPointer< const Self >	ConstPointer

typedef Superclass::OutputImageRegionType	OutputImageRegionType

typedef mitk::Image	InputImageType

typedef InputImageType::Pointer	InputImagePointer

typedef InputImageType::ConstPointer	InputImageConstPointer

typedef SlicedData::RegionType	InputImageRegionType

Public Types inherited from mitk::ImageSource
typedef ImageSource	Self

typedef BaseDataSource	Superclass

typedef itk::SmartPointer< Self >	Pointer

typedef itk::SmartPointer< const Self >	ConstPointer

typedef mitk::Image	OutputImageType
	Some convenient typedefs. More...

typedef OutputImageType	OutputType

typedef OutputImageType::Pointer	OutputImagePointer

typedef SlicedData::RegionType	OutputImageRegionType

Public Types inherited from mitk::BaseDataSource
typedef BaseDataSource	Self

typedef itk::ProcessObject	Superclass

typedef itk::SmartPointer< Self >	Pointer

typedef itk::SmartPointer< const Self >	ConstPointer

typedef BaseData	OutputType

typedef itk::DataObject::DataObjectIdentifierType	DataObjectIdentifierType

Static Protected Member Functions inherited from mitk::ImageSource
static ITK_THREAD_RETURN_TYPE	ThreaderCallback (void *arg)
	Static function used as a "callback" by the MultiThreader. More...

Static Protected Member Functions inherited from mitk::BaseDataSource
static Pointer	New ()

Detailed Description

Extracts a 2D slice of arbitrary geometry from a 3D or 4D image.

Deprecated:

This class is deprecated. Use mitk::ExtractSliceFilter instead.

See also: ExtractSliceFilter

See also: mitkImageMapper2D

This class takes a 3D or 4D mitk::Image as input and tries to extract one slice from it. This slice can be arbitrary oriented in space. The 2D slice is resliced by a vtk::ResliceImage filter if not perpendicular to the input image.

The world geometry of the plane to be extracted image must be given as an input to the filter in order to correctly calculate world coordinates of the extracted slice. Setting a timestep from which the plane should be extracted is optional.

Output will not be set if there was a problem extracting the desired slice.

Last contributor:

Author: T. Schwarz

Definition at line 64 of file mitkExtractDirectedPlaneImageFilter.h.

Constructor & Destructor Documentation

mitk::ExtractDirectedPlaneImageFilter::ExtractDirectedPlaneImageFilter ( )

protected

Definition at line 34 of file mitkExtractDirectedPlaneImageFilter.cpp.

References m_InPlaneResampleExtentByGeometry, m_ResliceInterpolationProperty, m_Reslicer, m_TargetTimestep, m_ThickSlicesMode, m_ThickSlicesNum, MITK_WARN, and mitk::New().

mitk::ExtractDirectedPlaneImageFilter::~ExtractDirectedPlaneImageFilter ( )

protectedvirtual

Definition at line 47 of file mitkExtractDirectedPlaneImageFilter.cpp.

Member Function Documentation

bool mitk::ExtractDirectedPlaneImageFilter::CalculateClippedPlaneBounds	(	const BaseGeometry *	boundingGeometry,
		const PlaneGeometry *	planeGeometry,
		double *	bounds
	)

protected

Definition at line 359 of file mitkExtractDirectedPlaneImageFilter.cpp.

References mitk::BaseGeometry::GetBoundingBox(), mitk::BaseGeometry::GetImageGeometry(), mitk::BaseGeometry::GetSpacing(), mitk::BaseGeometry::GetVtkTransform(), mitk::PlaneClipping::LineIntersectZero(), and mitk::New().

Pointer mitk::ExtractDirectedPlaneImageFilter::Clone ( ) const

void mitk::ExtractDirectedPlaneImageFilter::GenerateData ( )

overrideprotectedvirtual

A version of GenerateData() specific for image processing filters.

This implementation will split the processing across multiple threads. The buffer is allocated by this method. Then the BeforeThreadedGenerateData() method is called (if provided). Then, a series of threads are spawned each calling ThreadedGenerateData(). After all the threads have completed processing, the AfterThreadedGenerateData() method is called (if provided). If an image processing filter cannot be threaded, the filter should provide an implementation of GenerateData(). That implementation is responsible for allocating the output buffer. If a filter an be threaded, it should NOT provide a GenerateData() method but should provide a ThreadedGenerateData() instead.