ContourModel is a structure of linked vertices defining a contour in 3D space. The vertices are stored in a mitk::ContourElement is stored for each timestep. The contour line segments are implicitly defined by the given linked vertices. By default two control points are are linked by a straight line.It is possible to add vertices at front and end of the contour and to iterate in both directions. More...

#include <mitkContourModel.h>

Inheritance diagram for mitk::ContourModel:

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Collaboration diagram for mitk::ContourModel:

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Public Types
enum	LineSegmentInterpolation { LINEAR, B_SPLINE }
	Possible interpolation of the line segments between control points. More...

typedef mitk::ContourElement::VertexType	VertexType

typedef mitk::ContourElement::VertexListType	VertexListType

typedef mitk::ContourElement::VertexIterator	VertexIterator

typedef mitk::ContourElement::ConstVertexIterator	ConstVertexIterator

typedef std::vector< mitk::ContourElement::Pointer >	ContourModelSeries

Public Types inherited from mitk::BaseData
typedef BaseData	Self

typedef itk::DataObject	Superclass

typedef itk::SmartPointer< Self >	Pointer

typedef itk::SmartPointer< const Self >	ConstPointer

Public Member Functions
	mitkClassMacro (ContourModel, BaseData)

Pointer	Clone () const

VertexType *	GetSelectedVertex ()
	Get the current selected vertex. More...

void	Deselect ()
	Deselect vertex. More...

void	SetSelectedVertexAsControlPoint (bool isControlPoint=true)
	Set selected vertex as control point. More...

void	SetLineSegmentInterpolation (LineSegmentInterpolation interpolation)
	Set the interpolation of the line segments between control points. More...

LineSegmentInterpolation	GetLineSegmentInterpolation ()
	Get the interpolation of the line segments between control points. More...

void	AddVertex (mitk::Point3D &vertex, int timestep=0)
	Add a vertex to the contour at given timestep. The vertex is added at the end of contour. More...

void	AddVertex (VertexType &vertex, int timestep=0)
	Add a vertex to the contour at given timestep. The vertex is added at the end of contour. More...

void	AddVertex (const VertexType *vertex, int timestep=0)
	Add a vertex to the contour at given timestep. The vertex is added at the end of contour. More...

void	AddVertex (mitk::Point3D &vertex, bool isControlPoint, int timestep=0)
	Add a vertex to the contour. More...

void	AddVertexAtFront (mitk::Point3D &vertex, int timestep=0)
	Add a vertex to the contour at given timestep AT THE FRONT of the contour. The vertex is added at the FRONT of contour. More...

void	AddVertexAtFront (VertexType &vertex, int timestep=0)
	Add a vertex to the contour at given timestep AT THE FRONT of the contour. The vertex is added at the FRONT of contour. More...

void	AddVertexAtFront (mitk::Point3D &vertex, bool isControlPoint, int timestep=0)
	Add a vertex to the contour at given timestep AT THE FRONT of the contour. More...

void	InsertVertexAtIndex (mitk::Point3D &vertex, int index, bool isControlPoint=false, int timestep=0)
	Insert a vertex at given index. More...

bool	SetVertexAt (int pointId, const mitk::Point3D &point, unsigned int timestep=0)
	Set a coordinates for point at given index. More...

bool	SetVertexAt (int pointId, const VertexType *vertex, unsigned int timestep=0)
	Set a coordinates for point at given index. More...

bool	IsClosed (int timestep=0) const
	Return if the contour is closed or not. More...

void	Concatenate (mitk::ContourModel *other, int timestep=0, bool check=false)
	Concatenate two contours. The starting control point of the other will be added at the end of the contour. timestep - the timestep at which the vertex will be add ( default 0) check - check for intersections ( default false) More...

VertexIterator	Begin (int timestep=0) const
	Returns a const VertexIterator at the start element of the contour. More...

VertexIterator	IteratorBegin (int timestep=0) const
	Returns a const VertexIterator at the start element of the contour. More...

VertexIterator	End (int timestep=0) const
	Returns a const VertexIterator at the end element of the contour. More...

VertexIterator	IteratorEnd (int timestep=0) const
	Returns a const VertexIterator at the end element of the contour. More...

virtual void	Close (int timestep=0)
	Close the contour. The last control point will be linked with the first point. More...

virtual void	Open (int timestep=0)
	Set isClosed to false contour. The link between the last control point the first point will be removed. More...

virtual void	SetClosed (bool isClosed, int timestep=0)
	Set closed property to given boolean. More...

int	GetNumberOfVertices (int timestep=0) const
	Returns the number of vertices at a given timestep. More...

virtual bool	IsEmpty (int timestep) const
	Returns whether the contour model is empty at a given timestep. timestep - default = 0. More...

virtual bool	IsEmpty () const override
	Returns whether the contour model is empty. More...

virtual const VertexType *	GetVertexAt (int index, int timestep=0) const
	Returns the vertex at the index position within the container. More...

int	GetIndex (const VertexType *vertex, int timestep=0)
	Remove a vertex at given timestep within the container. More...

virtual bool	IsEmptyTimeStep (unsigned int t) const override
	Check if there isn't something at this timestep. More...

virtual bool	IsNearContour (mitk::Point3D &point, float eps, int timestep)
	Check if mouse cursor is near the contour. More...

bool	SelectVertexAt (int index, int timestep=0)
	Mark a vertex at an index in the container as selected. More...

bool	SetControlVertexAt (int index, int timestep=0)
	Mark a vertex at an index in the container as control point. More...

bool	SelectVertexAt (mitk::Point3D &point, float eps, int timestep=0)
	Mark a vertex at a given position in 3D space. More...

bool	SetControlVertexAt (mitk::Point3D &point, float eps, int timestep=0)

bool	RemoveVertexAt (int index, int timestep=0)
	Remove a vertex at given index within the container. More...

bool	RemoveVertex (const VertexType *vertex, int timestep=0)
	Remove a vertex at given timestep within the container. More...

bool	RemoveVertexAt (mitk::Point3D &point, float eps, int timestep=0)
	Remove a vertex at a query position in 3D space. More...

void	ShiftSelectedVertex (mitk::Vector3D &translate)
	Shift the currently selected vertex by a translation vector. More...

void	ShiftContour (mitk::Vector3D &translate, int timestep=0)
	Shift the whole contour by a translation vector at given timestep. More...

virtual void	Clear (int timestep)
	Clear the storage container at given timestep. More...

virtual void	Initialize () override
	Initialize all data objects. More...

void	Initialize (mitk::ContourModel &other)
	Initialize object with specs of other contour. Note: No data will be copied. More...

virtual void	SetRequestedRegionToLargestPossibleRegion () override
	Inherit from base data - no region support available for contourModel objects. More...

virtual bool	RequestedRegionIsOutsideOfTheBufferedRegion () override
	Inherit from base data - no region support available for contourModel objects. More...

virtual bool	VerifyRequestedRegion () override
	Inherit from base data - no region support available for contourModel objects. More...

virtual const mitk::BaseGeometry *	GetUpdatedGeometry (int t=0)
	Get the updated geometry with recomputed bounds. More...

virtual mitk::BaseGeometry *	GetGeometry (int t=0) const
	Get the BaseGeometry for timestep t. More...

virtual void	SetRequestedRegion (const itk::DataObject *data) override
	Inherit from base data - no region support available for contourModel objects. More...

virtual void	Expand (unsigned int timeSteps) override
	Expand the timebounds of the TimeGeometry to given number of timesteps. More...

virtual void	UpdateOutputInformation () override
	Update the OutputInformation of a ContourModel object. More...

virtual void	Clear () override
	Clear the storage container. More...

void	ExecuteOperation (Operation *operation) override
	overwrite if the Data can be called by an Interactor (StateMachine). More...

virtual void	RedistributeControlVertices (int period, int timestep)
	Redistributes ontrol vertices with a given period (as number of vertices) More...

Public Member Functions inherited from mitk::BaseData
virtual std::vector< std::string >	GetClassHierarchy () const

virtual const char *	GetClassName () const

const mitk::TimeGeometry *	GetTimeGeometry () const
	Return the TimeGeometry of the data as const pointer. More...

const mitk::TimeGeometry *	GetTimeSlicedGeometry () const
	Return the TimeGeometry of the data as const pointer. More...

mitk::TimeGeometry *	GetTimeGeometry ()
	Return the TimeGeometry of the data as pointer. More...

const mitk::TimeGeometry *	GetUpdatedTimeGeometry ()
	Return the TimeGeometry of the data. More...

const mitk::TimeGeometry *	GetUpdatedTimeSliceGeometry ()
	Return the TimeGeometry of the data. More...

const mitk::BaseGeometry *	GetUpdatedGeometry (int t=0)
	Return the BaseGeometry of the data at time t. More...

mitk::BaseGeometry *	GetGeometry (int t=0) const
	Return the geometry, which is a TimeGeometry, of the data as non-const pointer. More...

void	UpdateOutputInformation () override
	Update the information for this BaseData (the geometry in particular) so that it can be used as an output of a BaseProcess. More...

void	CopyInformation (const itk::DataObject *data) override
	Copy information from the specified data set. More...

virtual bool	IsInitialized () const
	Check whether the data has been initialized, i.e., at least the Geometry and other header data has been set. More...

void	ExecuteOperation (Operation *operation) override
	overwrite if the Data can be called by an Interactor (StateMachine). More...

virtual void	SetGeometry (BaseGeometry *aGeometry3D)
	Set the BaseGeometry of the data, which will be referenced (not copied!). Assumes the data object has only 1 time step ( is a 3D object ) and creates a new TimeGeometry which saves the given BaseGeometry. If an TimeGeometry has already been set for the object, it will be replaced after calling this function. More...

virtual void	SetTimeGeometry (TimeGeometry *geometry)
	Set the TimeGeometry of the data, which will be referenced (not copied!). More...

virtual void	SetClonedGeometry (const BaseGeometry *aGeometry3D)
	Set a clone of the provided TimeGeometry as TimeGeometry of the data. Assumes the data object has only 1 time step ( is a 3D object ) and creates a new TimeGeometry. If an TimeGeometry has already been set for the object, it will be replaced after calling this function. More...

virtual void	SetClonedTimeGeometry (const TimeGeometry *geometry)
	Set a clone of the provided TimeGeometry as TimeGeometry of the data. More...

virtual void	SetClonedGeometry (const BaseGeometry *aGeometry3D, unsigned int time)
	Set a clone of the provided geometry as BaseGeometry of a given time step. More...

mitk::PropertyList::Pointer	GetPropertyList () const
	Get the data's property list. More...

void	SetPropertyList (PropertyList *propertyList)
	Set the data's property list. More...

mitk::BaseProperty::Pointer	GetProperty (const char *propertyKey) const
	Get the property (instance of BaseProperty) with key propertyKey from the PropertyList, and set it to this, respectively;. More...

void	SetProperty (const char propertyKey, BaseProperty property)

virtual void	SetOrigin (const Point3D &origin)
	Convenience method for setting the origin of the BaseGeometry instances of all time steps. More...

itk::SmartPointer< mitk::BaseDataSource >	GetSource () const
	Get the process object that generated this data object. More...

unsigned int	GetTimeSteps () const
	Get the number of time steps from the TimeGeometry As the base data has not a data vector given by itself, the number of time steps is defined over the time sliced geometry. In sub classes, a better implementation could be over the length of the data vector. More...

virtual unsigned long	GetMTime () const override
	Get the modified time of the last change of the contents this data object or its geometry. More...

virtual void	Graft (const DataObject *) override

Public Member Functions inherited from mitk::OperationActor
	itkTypeMacroNoParent (OperationActor) virtual ~OperationActor()

Static Public Member Functions
static Pointer	New ()

Static Public Member Functions inherited from mitk::BaseData
static const char *	GetStaticNameOfClass ()

Protected Member Functions
	mitkCloneMacro (Self)

	ContourModel ()

	ContourModel (const mitk::ContourModel &other)

virtual	~ContourModel ()

virtual void	ClearData () override
	reset to non-initialized state, release memory More...

virtual void	InitializeEmpty () override
	Pure virtual; Must be used in subclasses to get a data object to a valid state. Should at least create one empty object and call Superclass::InitializeTimeGeometry() to ensure an existing valid geometry. More...

void	ShiftVertex (VertexType *vertex, mitk::Vector3D &vector)

Protected Member Functions inherited from mitk::BaseData
	BaseData ()

	BaseData (const BaseData &other)

	~BaseData ()

virtual void	InitializeTimeGeometry (unsigned int timeSteps=1)
	Initialize the TimeGeometry for a number of time steps. The TimeGeometry is initialized empty and evenly timed. In many cases it will be necessary to overwrite this in sub-classes. More...

virtual void	InitializeTimeSlicedGeometry (unsigned int timeSteps=1)
	Initialize the TimeGeometry for a number of time steps. The TimeGeometry is initialized empty and evenly timed. In many cases it will be necessary to overwrite this in sub-classes. More...

virtual void	PrintSelf (std::ostream &os, itk::Indent indent) const override

Protected Attributes
ContourModelSeries	m_ContourSeries

VertexType *	m_SelectedVertex

LineSegmentInterpolation	m_lineInterpolation

bool	m_UpdateBoundingBox

Protected Attributes inherited from mitk::BaseData
bool	m_LastRequestedRegionWasOutsideOfTheBufferedRegion

unsigned int	m_SourceOutputIndexDuplicate

bool	m_Initialized

Detailed Description

ContourModel is a structure of linked vertices defining a contour in 3D space. The vertices are stored in a mitk::ContourElement is stored for each timestep. The contour line segments are implicitly defined by the given linked vertices. By default two control points are are linked by a straight line.It is possible to add vertices at front and end of the contour and to iterate in both directions.

Points are specified containing coordinates and additional (data) information, see mitk::ContourElement. For accessing a specific vertex either an index or a position in 3D Space can be used. The vertices are best accessed by using a VertexIterator. Interaction with the contour is thus available without any mitk interactor class using the api of ContourModel. It is possible to shift single vertices also as shifting the whole contour.

A contour can be either open like a single curved line segment or closed. A closed contour can for example represent a jordan curve.

Display Options

The default mappers for this data structure are mitk::ContourModelGLMapper2D and mitk::ContourModelMapper3D. See these classes for display options which can can be set via properties.

Definition at line 51 of file mitkContourModel.h.

Member Typedef Documentation

typedef mitk::ContourElement::ConstVertexIterator mitk::ContourModel::ConstVertexIterator

Definition at line 62 of file mitkContourModel.h.

typedef std::vector<mitk::ContourElement::Pointer> mitk::ContourModel::ContourModelSeries

Definition at line 63 of file mitkContourModel.h.

typedef mitk::ContourElement::VertexIterator mitk::ContourModel::VertexIterator

Definition at line 61 of file mitkContourModel.h.

typedef mitk::ContourElement::VertexListType mitk::ContourModel::VertexListType

Definition at line 60 of file mitkContourModel.h.

typedef mitk::ContourElement::VertexType mitk::ContourModel::VertexType

Definition at line 59 of file mitkContourModel.h.

Member Enumeration Documentation

enum mitk::ContourModel::LineSegmentInterpolation

Possible interpolation of the line segments between control points.

Enumerator
LINEAR
B_SPLINE

Definition at line 67 of file mitkContourModel.h.

Constructor & Destructor Documentation

mitk::ContourModel::ContourModel ( )

protected

Definition at line 19 of file mitkContourModel.cpp.

References InitializeEmpty().

mitk::ContourModel::ContourModel ( const mitk::ContourModel & other )

protected

Definition at line 25 of file mitkContourModel.cpp.

References m_SelectedVertex.

mitk::ContourModel::~ContourModel ( )

protectedvirtual

Definition at line 31 of file mitkContourModel.cpp.

Member Function Documentation

void mitk::ContourModel::AddVertex	(	mitk::Point3D &	vertex,
		int	timestep = `0`
	)

Add a vertex to the contour at given timestep. The vertex is added at the end of contour.

Parameters

vertex	- coordinate representation of a control point
timestep	- the timestep at which the vertex will be add ( default 0)

Adding a vertex to a timestep which exceeds the timebounds of the contour will not be added, the TimeGeometry will not be expanded.

Definition at line 37 of file mitkContourModel.cpp.

Referenced by mitk::ContourTool::OnMouseMoved(), mitk::CorrectorTool2D::OnMouseMoved(), mitk::ContourTool::OnMousePressed(), mitk::CorrectorTool2D::OnMousePressed(), and mitk::ContourModelLiveWireInteractor::SplitContourFromSelectedVertex().

void mitk::ContourModel::AddVertex	(	VertexType &	vertex,
		int	timestep = `0`
	)

Add a vertex to the contour at given timestep. The vertex is added at the end of contour.

Parameters

vertex	- coordinate representation of a control point
timestep	- the timestep at which the vertex will be add ( default 0)

Adding a vertex to a timestep which exceeds the timebounds of the contour will not be added, the TimeGeometry will not be expanded.

Definition at line 56 of file mitkContourModel.cpp.

void mitk::ContourModel::AddVertex	(	const VertexType *	vertex,
		int	timestep = `0`
	)

Add a vertex to the contour at given timestep. The vertex is added at the end of contour.

Parameters

vertex	- coordinate representation of a control point
timestep	- the timestep at which the vertex will be add ( default 0)

Adding a vertex to a timestep which exceeds the timebounds of the contour will not be added, the TimeSlicedGeometry will not be expanded.

Definition at line 67 of file mitkContourModel.cpp.

void mitk::ContourModel::AddVertex	(	mitk::Point3D &	vertex,
		bool	isControlPoint,
		int	timestep = `0`
	)

Add a vertex to the contour.

Parameters

vertex	- coordinate representation of a control point
timestep	- the timestep at which the vertex will be add ( default 0)
isControlPoint	- specifies the vertex to be handled in a special way (e.g. control points will be rendered).

Adding a vertex to a timestep which exceeds the timebounds of the contour will not be added, the TimeGeometry will not be expanded.

Definition at line 45 of file mitkContourModel.cpp.

void mitk::ContourModel::AddVertexAtFront	(	mitk::Point3D &	vertex,
		int	timestep = `0`
	)

Add a vertex to the contour at given timestep AT THE FRONT of the contour. The vertex is added at the FRONT of contour.

Parameters

vertex	- coordinate representation of a control point
timestep	- the timestep at which the vertex will be add ( default 0)

Adding a vertex to a timestep which exceeds the timebounds of the contour will not be added, the TimeGeometry will not be expanded.

Definition at line 75 of file mitkContourModel.cpp.

void mitk::ContourModel::AddVertexAtFront	(	VertexType &	vertex,
		int	timestep = `0`
	)

Add a vertex to the contour at given timestep AT THE FRONT of the contour. The vertex is added at the FRONT of contour.

Parameters

vertex	- coordinate representation of a control point
timestep	- the timestep at which the vertex will be add ( default 0)

Adding a vertex to a timestep which exceeds the timebounds of the contour will not be added, the TimeGeometry will not be expanded.

Definition at line 94 of file mitkContourModel.cpp.

void mitk::ContourModel::AddVertexAtFront	(	mitk::Point3D &	vertex,
		bool	isControlPoint,
		int	timestep = `0`
	)

Add a vertex to the contour at given timestep AT THE FRONT of the contour.

Parameters

vertex	- coordinate representation of a control point
timestep	- the timestep at which the vertex will be add ( default 0)
isControlPoint	- specifies the vertex to be handled in a special way (e.g. control points will be rendered).

Adding a vertex to a timestep which exceeds the timebounds of the contour will not be added, the TimeGeometry will not be expanded.

Definition at line 83 of file mitkContourModel.cpp.

mitk::ContourModel::VertexIterator mitk::ContourModel::Begin ( int timestep = 0 ) const

Returns a const VertexIterator at the start element of the contour.

Exceptions

mitk::Exception if the timestep is invalid.

Definition at line 256 of file mitkContourModel.cpp.

Referenced by mitk::ContourModelUtils::BackProjectContourFrom2DSlice(), mitk::ContourModelSetMapper3D::GenerateDataForRenderer(), mitk::CorrectorTool2D::OnMouseReleased(), and mitk::ContourModelUtils::ProjectContourTo2DSlice().

void mitk::ContourModel::Clear ( int timestep )

virtual

Clear the storage container at given timestep.

All control points are removed at timestep.

Definition at line 430 of file mitkContourModel.cpp.

Referenced by mitk::ContourModelLiveWireInteractor::OnFinishEditing().

void mitk::ContourModel::Clear ( )

overridevirtual

Clear the storage container.

The object is set to initial state. All control points are removed and the number of timesteps are set to 1.

Reimplemented from mitk::BaseData.

Definition at line 492 of file mitkContourModel.cpp.

void mitk::ContourModel::ClearData ( )

overrideprotectedvirtual

reset to non-initialized state, release memory

Reimplemented from mitk::BaseData.

Definition at line 512 of file mitkContourModel.cpp.

Pointer mitk::ContourModel::Clone ( ) const

void mitk::ContourModel::Close ( int timestep = 0 )

virtual

Close the contour. The last control point will be linked with the first point.

Definition at line 195 of file mitkContourModel.cpp.

void mitk::ContourModel::Concatenate	(	mitk::ContourModel *	other,
		int	timestep = `0`,
		bool	check = `false`
	)

Concatenate two contours. The starting control point of the other will be added at the end of the contour. timestep - the timestep at which the vertex will be add ( default 0) check - check for intersections ( default false)

Definition at line 242 of file mitkContourModel.cpp.

References m_ContourSeries.

void mitk::ContourModel::Deselect ( )

inline

Deselect vertex.

Definition at line 80 of file mitkContourModel.h.

Referenced by mitk::ContourModelInteractor::OnCheckPointClick(), mitk::ContourModelLiveWireInteractor::OnCheckPointClick(), and mitk::ContourModelInteractor::OnFinishEditing().

mitk::ContourModel::VertexIterator mitk::ContourModel::End ( int timestep = 0 ) const

Returns a const VertexIterator at the end element of the contour.

Exceptions

mitk::Exception if the timestep is invalid.

Definition at line 274 of file mitkContourModel.cpp.

Referenced by mitk::ContourModelUtils::BackProjectContourFrom2DSlice(), mitk::ContourModelSetMapper3D::GenerateDataForRenderer(), mitk::CorrectorTool2D::OnMouseReleased(), and mitk::ContourModelUtils::ProjectContourTo2DSlice().

void mitk::ContourModel::ExecuteOperation ( mitk::Operation * operation )

overridevirtual

overwrite if the Data can be called by an Interactor (StateMachine).

Implements mitk::OperationActor.

Definition at line 636 of file mitkContourModel.cpp.

void mitk::ContourModel::Expand ( unsigned int timeSteps )

overridevirtual

Expand the timebounds of the TimeGeometry to given number of timesteps.

Reimplemented from mitk::BaseData.

Definition at line 442 of file mitkContourModel.cpp.

References mitk::ContourElement::New().

Referenced by mitk::ContourTool::OnMousePressed(), and mitk::CorrectorTool2D::OnMousePressed().

mitk::BaseGeometry * mitk::ContourModel::GetGeometry ( int t = 0 ) const

virtual

Get the BaseGeometry for timestep t.

Definition at line 482 of file mitkContourModel.cpp.

Referenced by mitk::ContourModelInteractor::OnCheckPointClick().

int mitk::ContourModel::GetIndex	(	const VertexType *	vertex,
		int	timestep = `0`
	)

Remove a vertex at given timestep within the container.

Returns: index of vertex. -1 if not found.

Definition at line 186 of file mitkContourModel.cpp.

LineSegmentInterpolation mitk::ContourModel::GetLineSegmentInterpolation ( )

inline

Get the interpolation of the line segments between control points.

Definition at line 102 of file mitkContourModel.h.

int mitk::ContourModel::GetNumberOfVertices ( int timestep = 0 ) const

Returns the number of vertices at a given timestep.

Parameters

timestep - default = 0

Definition at line 168 of file mitkContourModel.cpp.

Referenced by mitk::ContourModelToSurfaceFilter::GenerateData(), mitk::ContourModelSetToImageFilter::GenerateData(), mitk::ContourModelMapper2D::GenerateDataForRenderer(), mitk::ContourModelSetMapper3D::GenerateDataForRenderer(), mitk::ContourModelLiveWireInteractor::OnDeletePoint(), and mitk::RegionGrowingTool::OnMouseReleased().

VertexType* mitk::ContourModel::GetSelectedVertex ( )

inline

Get the current selected vertex.

Definition at line 77 of file mitkContourModel.h.

Referenced by mitk::ContourModelGLMapper2DBase::InternalDrawContour(), mitk::ContourModelSetGLMapper2D::InternalDrawContour(), mitk::ContourModelInteractor::OnDeletePoint(), mitk::ContourModelLiveWireInteractor::OnDeletePoint(), and mitk::ContourModelLiveWireInteractor::SplitContourFromSelectedVertex().

const mitk::BaseGeometry * mitk::ContourModel::GetUpdatedGeometry ( int t = 0 )

virtual

Get the updated geometry with recomputed bounds.

Definition at line 477 of file mitkContourModel.cpp.

const mitk::ContourModel::VertexType * mitk::ContourModel::GetVertexAt	(	int	index,
		int	timestep = `0`
	)		const

virtual

Returns the vertex at the index position within the container.

Definition at line 177 of file mitkContourModel.cpp.

Referenced by mitk::ContourModelSetToImageFilter::GenerateData(), mitk::ContourModelGLMapper2DBase::InternalDrawContour(), mitk::ContourModelSetGLMapper2D::InternalDrawContour(), and mitk::RegionGrowingTool::OnMouseReleased().

void mitk::ContourModel::Initialize ( )

overridevirtual

Initialize all data objects.

Definition at line 521 of file mitkContourModel.cpp.

Referenced by mitk::ContourTool::OnMousePressed(), and mitk::CorrectorTool2D::OnMousePressed().

void mitk::ContourModel::Initialize ( mitk::ContourModel & other )

Initialize object with specs of other contour. Note: No data will be copied.

Definition at line 528 of file mitkContourModel.cpp.

References mitk::BaseData::GetTimeGeometry(), IsClosed(), m_lineInterpolation, and mitk::ContourElement::New().

void mitk::ContourModel::InitializeEmpty ( )

overrideprotectedvirtual

Pure virtual; Must be used in subclasses to get a data object to a valid state. Should at least create one empty object and call Superclass::InitializeTimeGeometry() to ensure an existing valid geometry.

Reimplemented from mitk::BaseData.

Definition at line 545 of file mitkContourModel.cpp.

References LINEAR, and mitk::ContourElement::New().

Referenced by ContourModel().

void mitk::ContourModel::InsertVertexAtIndex	(	mitk::Point3D &	vertex,
		int	index,
		bool	isControlPoint = `false`,
		int	timestep = `0`
	)

Insert a vertex at given index.

Definition at line 140 of file mitkContourModel.cpp.

bool mitk::ContourModel::IsClosed ( int timestep = 0 ) const

Return if the contour is closed or not.

Definition at line 292 of file mitkContourModel.cpp.

Referenced by mitk::ContourModelMapper3D::CreateVtkPolyDataFromContour(), mitk::ContourModelToSurfaceFilter::GenerateData(), Initialize(), mitk::ContourModelGLMapper2DBase::InternalDrawContour(), mitk::ContourModelSetGLMapper2D::InternalDrawContour(), mitk::ContourModelLiveWireInteractor::OnDeletePoint(), mitk::ContourModelLiveWireInteractor::OnMovePoint(), and mitk::ContourModelWriter::WriteXML().

bool mitk::ContourModel::IsEmpty ( int timestep ) const

virtual

Returns whether the contour model is empty at a given timestep. timestep - default = 0.

Definition at line 154 of file mitkContourModel.cpp.

Referenced by mitk::ContourModelLiveWireInteractor::OnDeletePoint().

bool mitk::ContourModel::IsEmpty ( ) const

overridevirtual

Returns whether the contour model is empty.

Reimplemented from mitk::BaseData.

Definition at line 163 of file mitkContourModel.cpp.

bool mitk::ContourModel::IsEmptyTimeStep ( unsigned int t ) const

overridevirtual

Check if there isn't something at this timestep.

Reimplemented from mitk::BaseData.

Definition at line 228 of file mitkContourModel.cpp.

Referenced by mitk::ContourModelGLMapper2DBase::InternalDrawContour(), and mitk::ContourModelSetGLMapper2D::InternalDrawContour().

bool mitk::ContourModel::IsNearContour	(	mitk::Point3D &	point,
		float	eps,
		int	timestep
	)

virtual

Check if mouse cursor is near the contour.

Definition at line 233 of file mitkContourModel.cpp.

Referenced by mitk::ContourModelInteractor::IsHovering(), and mitk::ContourModelLiveWireInteractor::IsHovering().

mitk::ContourModel::VertexIterator mitk::ContourModel::IteratorBegin ( int timestep = 0 ) const

Returns a const VertexIterator at the start element of the contour.

Exceptions

mitk::Exception if the timestep is invalid.

Definition at line 261 of file mitkContourModel.cpp.

References mitkThrow.

Referenced by mitk::ImageLiveWireContourModelFilter::CreateDynamicCostMapByITK(), mitk::ContourModelMapper3D::CreateVtkPolyDataFromContour(), mitk::ContourModelToSurfaceFilter::GenerateData(), mitk::ContourModelGLMapper2DBase::InternalDrawContour(), mitk::ContourModelSetGLMapper2D::InternalDrawContour(), mitk::ContourModelLiveWireInteractor::OnCheckPointClick(), mitk::ContourModelLiveWireInteractor::SplitContourFromSelectedVertex(), and mitk::ContourModelWriter::WriteXML().

mitk::ContourModel::VertexIterator mitk::ContourModel::IteratorEnd ( int timestep = 0 ) const

Returns a const VertexIterator at the end element of the contour.

Exceptions

mitk::Exception if the timestep is invalid.

Definition at line 279 of file mitkContourModel.cpp.

References mitkThrow.

Referenced by mitk::ImageLiveWireContourModelFilter::CreateDynamicCostMapByITK(), mitk::ContourModelMapper3D::CreateVtkPolyDataFromContour(), mitk::ContourModelToSurfaceFilter::GenerateData(), mitk::ContourModelGLMapper2DBase::InternalDrawContour(), mitk::ContourModelSetGLMapper2D::InternalDrawContour(), mitk::ContourModelLiveWireInteractor::OnCheckPointClick(), mitk::ContourModelLiveWireInteractor::SplitContourFromSelectedVertex(), and mitk::ContourModelWriter::WriteXML().

mitk::ContourModel::mitkClassMacro	(	ContourModel	,
		BaseData
	)

mitk::ContourModel::mitkCloneMacro ( Self )

protected

static Pointer mitk::ContourModel::New ( )

static

Referenced by mitk::ContourModelUtils::BackProjectContourFrom2DSlice(), mitk::ContourUtils::BackProjectContourFrom2DSlice(), mitk::ContourModelMapper2D::CreateVtkPolyDataFromContour(), mitk::FeedbackContourTool::FeedbackContourTool(), mitk::ContourUtils::FillContourInSlice(), mitk::ContourModelSubDivisionFilter::GenerateData(), mitk::ImageToContourModelFilter::Itk2DContourExtraction(), mitk::PaintbrushTool::MouseMoved(), mitk::ContourModelLiveWireInteractor::OnCheckPointClick(), mitk::ContourModelLiveWireInteractor::OnDeletePoint(), mitk::LiveWireTool2D::OnInitLiveWire(), mitk::LiveWireTool2D::OnLastSegmentDelete(), mitk::RegionGrowingTool::OnMouseMoved(), mitk::RegionGrowingTool::OnMousePressedOutside(), mitk::CorrectorTool2D::OnMouseReleased(), mitk::RegionGrowingTool::OnMouseReleased(), mitk::ContourModelLiveWireInteractor::OnMovePoint(), mitk::PaintbrushTool::PaintbrushTool(), mitk::ContourUtils::ProjectContourTo2DSlice(), mitk::ContourModelUtils::ProjectContourTo2DSlice(), mitk::ContourModelReader::Read(), mitk::RTStructureSetReader::ReadStructureSet(), and mitk::PaintbrushTool::UpdateContour().

void mitk::ContourModel::Open ( int timestep = 0 )

virtual

Set isClosed to false contour. The link between the last control point the first point will be removed.

Definition at line 206 of file mitkContourModel.cpp.

void mitk::ContourModel::RedistributeControlVertices	(	int	period,
		int	timestep
	)

virtual

Redistributes ontrol vertices with a given period (as number of vertices)

Parameters

period	- the number of vertices between control points.
timestep	- at this timestep all lines will be rebuilt.

Definition at line 501 of file mitkContourModel.cpp.

bool mitk::ContourModel::RemoveVertex	(	const VertexType *	vertex,
		int	timestep = `0`
	)

Remove a vertex at given timestep within the container.

Returns: true = the vertex was successfuly removed.

Definition at line 347 of file mitkContourModel.cpp.

Referenced by mitk::ContourModelInteractor::OnDeletePoint().

bool mitk::ContourModel::RemoveVertexAt	(	int	index,
		int	timestep = `0`
	)

Remove a vertex at given index within the container.

Returns: true = the vertex was successfuly removed; false = wrong index.

Definition at line 362 of file mitkContourModel.cpp.

Referenced by mitk::ContourModelLiveWireInteractor::OnDeletePoint().

bool mitk::ContourModel::RemoveVertexAt	(	mitk::Point3D &	point,
		float	eps,
		int	timestep = `0`
	)

Remove a vertex at a query position in 3D space.

The vertex to be removed will be search by nearest neighbour search. Note that possibly no vertex at this position and eps is stored inside the contour.

Returns: true = the vertex was successfuly removed; false = no vertex found.

Definition at line 377 of file mitkContourModel.cpp.

bool mitk::ContourModel::RequestedRegionIsOutsideOfTheBufferedRegion ( )

overridevirtual

Inherit from base data - no region support available for contourModel objects.

Implements mitk::BaseData.

Definition at line 465 of file mitkContourModel.cpp.

bool mitk::ContourModel::SelectVertexAt	(	int	index,
		int	timestep = `0`
	)

Mark a vertex at an index in the container as selected.

Definition at line 310 of file mitkContourModel.cpp.

Referenced by mitk::ContourModelInteractor::OnCheckPointClick(), and mitk::ContourModelLiveWireInteractor::OnCheckPointClick().

bool mitk::ContourModel::SelectVertexAt	(	mitk::Point3D &	point,
		float	eps,
		int	timestep = `0`
	)

Mark a vertex at a given position in 3D space.

Parameters

point	- query point in 3D space
eps	- radius for nearest neighbour search (error bound).
timestep	- search at this timestep

Returns: true = vertex found; false = no vertex found

Definition at line 301 of file mitkContourModel.cpp.

void mitk::ContourModel::SetClosed	(	bool	isClosed,
		int	timestep = `0`
	)

virtual

Set closed property to given boolean.

false - The link between the last control point the first point will be removed. true - The last control point will be linked with the first point.

Definition at line 217 of file mitkContourModel.cpp.

Referenced by mitk::CorrectorTool2D::CorrectorTool2D(), mitk::ContourTool::OnMousePressed(), and mitk::CorrectorTool2D::OnMousePressed().

bool mitk::ContourModel::SetControlVertexAt	(	int	index,
		int	timestep = `0`
	)

Mark a vertex at an index in the container as control point.

Definition at line 333 of file mitkContourModel.cpp.

References mitk::ContourElement::ContourModelVertex::IsControlPoint.

bool mitk::ContourModel::SetControlVertexAt	(	mitk::Point3D &	point,
		float	eps,
		int	timestep = `0`
	)

Definition at line 319 of file mitkContourModel.cpp.

References mitk::ContourElement::ContourModelVertex::IsControlPoint.

void mitk::ContourModel::SetLineSegmentInterpolation ( LineSegmentInterpolation interpolation )

inline

Set the interpolation of the line segments between control points.

Definition at line 94 of file mitkContourModel.h.

void mitk::ContourModel::SetRequestedRegion ( const itk::DataObject * data )

overridevirtual

Inherit from base data - no region support available for contourModel objects.

Implements mitk::BaseData.

Definition at line 487 of file mitkContourModel.cpp.

void mitk::ContourModel::SetRequestedRegionToLargestPossibleRegion ( )

overridevirtual

Inherit from base data - no region support available for contourModel objects.

Implements mitk::BaseData.

Definition at line 460 of file mitkContourModel.cpp.

void mitk::ContourModel::SetSelectedVertexAsControlPoint ( bool isControlPoint = true )

inline

Set selected vertex as control point.

Definition at line 83 of file mitkContourModel.h.

Referenced by mitk::ContourModelInteractor::OnCheckPointClick(), and mitk::ContourModelLiveWireInteractor::OnCheckPointClick().

bool mitk::ContourModel::SetVertexAt	(	int	pointId,
		const mitk::Point3D &	point,
		unsigned int	timestep = `0`
	)

Set a coordinates for point at given index.

Definition at line 105 of file mitkContourModel.cpp.

bool mitk::ContourModel::SetVertexAt	(	int	pointId,
		const VertexType *	vertex,
		unsigned int	timestep = `0`
	)

Set a coordinates for point at given index.

Definition at line 121 of file mitkContourModel.cpp.

void mitk::ContourModel::ShiftContour	(	mitk::Vector3D &	translate,
		int	timestep = `0`
	)

Shift the whole contour by a translation vector at given timestep.

Parameters

translate	- the translation vector.
timestep	- at this timestep the contour will be shifted.

Definition at line 402 of file mitkContourModel.cpp.

Referenced by mitk::ContourModelInteractor::OnMoveContour().

void mitk::ContourModel::ShiftSelectedVertex ( mitk::Vector3D & translate )

Shift the currently selected vertex by a translation vector.

Parameters

translate - the translation vector.

Definition at line 392 of file mitkContourModel.cpp.

Referenced by mitk::ContourModelInteractor::OnMovePoint().

void mitk::ContourModel::ShiftVertex	(	VertexType *	vertex,
		mitk::Vector3D &	vector
	)

protected

Definition at line 423 of file mitkContourModel.cpp.

References mitk::ContourElement::ContourModelVertex::Coordinates.

void mitk::ContourModel::UpdateOutputInformation ( )

overridevirtual

Update the OutputInformation of a ContourModel object.

The BoundingBox of the contour will be updated, if necessary.

Definition at line 558 of file mitkContourModel.cpp.

References mitk::New(), and mitk::BaseGeometry::SetBounds().

Referenced by mitk::ContourModelGLMapper2DBase::InternalDrawContour(), mitk::ContourModelSetGLMapper2D::InternalDrawContour(), mitk::ContourModelMapper2D::Update(), mitk::ContourModelMapper3D::Update(), and mitk::ContourModelSetMapper3D::Update().

bool mitk::ContourModel::VerifyRequestedRegion ( )

overridevirtual

Inherit from base data - no region support available for contourModel objects.

Implements mitk::BaseData.

Definition at line 471 of file mitkContourModel.cpp.

Member Data Documentation

ContourModelSeries mitk::ContourModel::m_ContourSeries

protected

Definition at line 434 of file mitkContourModel.h.

Referenced by Concatenate().

LineSegmentInterpolation mitk::ContourModel::m_lineInterpolation

protected

Definition at line 440 of file mitkContourModel.h.

Referenced by Initialize().

VertexType* mitk::ContourModel::m_SelectedVertex

protected

Definition at line 437 of file mitkContourModel.h.

Referenced by ContourModel().

bool mitk::ContourModel::m_UpdateBoundingBox

protected

Definition at line 443 of file mitkContourModel.h.

The documentation for this class was generated from the following files:

Public Types

Public Member Functions

Static Public Member Functions

Protected Member Functions

Protected Attributes

Detailed Description

Display Options

Member Typedef Documentation

Member Enumeration Documentation

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation