mitk::ConnectomicsNetworkMapper3D Class Reference

Mapper for Networks. More...

#include <mitkConnectomicsNetworkMapper3D.h>

Inheritance diagram for mitk::ConnectomicsNetworkMapper3D:

Collaboration diagram for mitk::ConnectomicsNetworkMapper3D:

Public Member Functions
	mitkClassMacro (ConnectomicsNetworkMapper3D, VtkMapper)
Pointer	Clone () const
virtual vtkProp *	GetVtkProp (mitk::BaseRenderer *renderer) override
virtual void	GenerateDataForRenderer (mitk::BaseRenderer *renderer) override
	Generate the data needed for rendering into renderer. More...
virtual const mitk::ConnectomicsNetwork *	GetInput ()
Public Member Functions inherited from mitk::VtkMapper
virtual std::vector< std::string >	GetClassHierarchy () const override
virtual const char *	GetClassName () const
virtual bool	IsVtkBased () const override
	Returns whether this is an vtk-based mapper. More...
void	MitkRender (mitk::BaseRenderer *renderer, mitk::VtkPropRenderer::RenderType type) override
	Determines which geometry should be rendered (opaque, translucent, volumetric, overlay) and calls the appropriate function. More...
virtual void	MitkRenderOverlay (BaseRenderer *renderer)
	Checks visibility and renders the overlay. More...
virtual void	MitkRenderOpaqueGeometry (BaseRenderer *renderer)
	Checks visibility and renders untransparent geometry. More...
virtual void	MitkRenderTranslucentGeometry (BaseRenderer *renderer)
	Checks visiblity and renders transparent geometry. More...
virtual void	MitkRenderVolumetricGeometry (BaseRenderer *renderer)
	Checks visibility and renders volumes. More...
virtual bool	HasVtkProp (const vtkProp *prop, BaseRenderer *renderer)
	Returns true if this mapper owns the specified vtkProp for the given BaseRenderer. More...
virtual void	UpdateVtkTransform (mitk::BaseRenderer *renderer)
	Set the vtkTransform of the m_Prop3D for the current time step of renderer. More...
virtual void	ApplyProperties (vtkActor *actor, mitk::BaseRenderer *renderer)
	Apply color and opacity properties read from the PropertyList. More...
void	ApplyShaderProperties (mitk::BaseRenderer *renderer)
	SHADERTODO. More...
virtual void	ApplyColorAndOpacityProperties (mitk::BaseRenderer *renderer, vtkActor *actor) override
	Apply color and opacity properties read from the PropertyList. Called by mapper subclasses. More...
virtual void	ReleaseGraphicsResources (mitk::BaseRenderer *)
	Release vtk-based graphics resources that are being consumed by this mapper. More...
Public Member Functions inherited from mitk::Mapper
virtual void	SetDataNode (DataNode *_arg)
	Set the DataNode containing the data to map. More...
virtual DataNode *	GetDataNode () const
	Get the DataNode containing the data to map. Method only returns valid DataNode Pointer if the mapper belongs to a data node. Otherwise, the returned DataNode Pointer might be invalid. More...
BaseData *	GetData () const
	Get the data to map. More...
virtual bool	GetColor (float rgb[3], BaseRenderer *renderer, const char *name="color") const
	Convenience access method for color properties (instances of ColorProperty) More...
virtual bool	GetVisibility (bool &visible, BaseRenderer *renderer, const char *name="visible") const
	Convenience access method for visibility properties (instances of BoolProperty) More...
virtual bool	GetOpacity (float &opacity, BaseRenderer *renderer, const char *name="opacity") const
	Convenience access method for opacity properties (instances of FloatProperty) More...
virtual bool	GetLevelWindow (LevelWindow &levelWindow, BaseRenderer *renderer, const char *name="levelwindow") const
	Convenience access method for color properties (instances of LevelWindoProperty) More...
virtual bool	IsVisible (BaseRenderer *renderer, const char *name="visible") const
	Convenience access method for visibility properties (instances of BoolProperty). Return value is the visibility. Default is visible==true, i.e., true is returned even if the property (propertyKey) is not found. More...
virtual void	Update (BaseRenderer *renderer)
	Calls the time step of the input data for the specified renderer and checks whether the time step is valid and calls method GenerateDataForRenderer() More...
int	GetTimestep () const
	Returns the current time step as calculated from the renderer. More...
virtual bool	IsLODEnabled (BaseRenderer *) const

Static Public Member Functions
static Pointer	New ()
static void	SetDefaultProperties (DataNode *node, BaseRenderer *renderer=nullptr, bool overwrite=false)
static void	SetVtkMapperImmediateModeRendering (vtkMapper *mapper)
Static Public Member Functions inherited from mitk::VtkMapper
static const char *	GetStaticNameOfClass ()
static void	SetVtkMapperImmediateModeRendering (vtkMapper *mapper)
	Re-issues all drawing commands required to describe the entire scene each time a new frame is required, regardless of actual changes. More...
Static Public Member Functions inherited from mitk::Mapper
static const char *	GetStaticNameOfClass ()
static void	SetDefaultProperties (DataNode *node, BaseRenderer *renderer=nullptr, bool overwrite=false)
	Set default values of properties used by this mapper to node. More...

Protected Member Functions
	ConnectomicsNetworkMapper3D ()
virtual	~ConnectomicsNetworkMapper3D ()
void	UpdateVtkObjects ()
bool	PropertiesChanged ()
	Returns true if the properties have changed since the last data generation. More...
double	FillNodeParameterVector (std::vector< double > *parameterVector, std::string parameterName)
double	FillEdgeParameterVector (std::vector< double > *parameterVector, std::string parameterName)
void	FillNodeFilterBoolVector (std::vector< bool > *boolVector, std::string parameterName)
void	FillEdgeFilterBoolVector (std::vector< bool > *boolVector, std::string parameterName)
Protected Member Functions inherited from mitk::VtkMapper
	VtkMapper ()
virtual	~VtkMapper ()
Protected Member Functions inherited from mitk::Mapper
	Mapper ()
	explicit constructor which disallows implicit conversions More...
virtual	~Mapper ()
	virtual destructor in order to derive from this class More...
virtual void	GenerateData ()
	Generate the data needed for rendering (independent of a specific renderer) More...
virtual void	CalculateTimeStep (BaseRenderer *renderer)
	Updates the time step, which is sometimes needed in subclasses. More...
virtual void	ResetMapper (BaseRenderer *)
	Reset the mapper (i.e., make sure that nothing is displayed) if no valid data is present. In most cases the reimplemented function disables the according actors (toggling visibility off) More...
virtual OverlayManager *	GetOverlayManager () const

Protected Attributes
vtkPropAssembly *	m_NetworkAssembly
std::string	m_ChosenRenderingScheme
std::string	m_ChosenEdgeFilter
std::string	m_EdgeThresholdParameter
double	m_EdgeThreshold
std::string	m_ChosenNodeFilter
std::string	m_NodeThresholdParameter
double	m_NodeThreshold
mitk::Color	m_NodeColorStart
mitk::Color	m_NodeColorEnd
double	m_NodeRadiusStart
double	m_NodeRadiusEnd
std::string	m_ChosenNodeLabel
mitk::Color	m_EdgeColorStart
mitk::Color	m_EdgeColorEnd
double	m_EdgeRadiusStart
double	m_EdgeRadiusEnd
std::string	m_NodeRadiusParameter
std::string	m_NodeColorParameter
std::string	m_EdgeRadiusParameter
std::string	m_EdgeColorParameter
std::string	m_BalloonText
std::string	m_BalloonNodeStats
mitk::FreeSurferParcellationTranslator::Pointer	m_Translator
std::string	m_AllNodeLabels
mitk::TextOverlay3D::Pointer	m_TextOverlay3D
Protected Attributes inherited from mitk::Mapper
mitk::DataNode *	m_DataNode

Additional Inherited Members
Public Types inherited from mitk::VtkMapper
typedef VtkMapper	Self
typedef Mapper	Superclass
typedef itk::SmartPointer< Self >	Pointer
typedef itk::SmartPointer< const Self >	ConstPointer
Public Types inherited from mitk::Mapper
typedef Mapper	Self
typedef itk::Object	Superclass
typedef itk::SmartPointer< Self >	Pointer
typedef itk::SmartPointer< const Self >	ConstPointer
Public Attributes inherited from mitk::VtkMapper
mitk::LocalStorageHandler< VtkMapperLocalStorage >	m_VtkMapperLSH

Detailed Description

Mapper for Networks.

Definition at line 79 of file mitkConnectomicsNetworkMapper3D.h.

Constructor & Destructor Documentation

mitk::ConnectomicsNetworkMapper3D::ConnectomicsNetworkMapper3D ( )

protected

Definition at line 44 of file mitkConnectomicsNetworkMapper3D.cpp.

References m_NetworkAssembly, m_Translator, and mitk::New().

mitk::ConnectomicsNetworkMapper3D::~ConnectomicsNetworkMapper3D ( )

protectedvirtual

Definition at line 50 of file mitkConnectomicsNetworkMapper3D.cpp.

Member Function Documentation

Pointer mitk::ConnectomicsNetworkMapper3D::Clone

(

)

const

void mitk::ConnectomicsNetworkMapper3D::FillEdgeFilterBoolVector ( std::vector< bool > *  boolVector, std::string  parameterName  )

protected

Definition at line 783 of file mitkConnectomicsNetworkMapper3D.cpp.

References mitk::connectomicsRenderingEdgeParameterCentrality, and mitk::connectomicsRenderingEdgeParameterWeight.

double mitk::ConnectomicsNetworkMapper3D::FillEdgeParameterVector ( std::vector< double > *  parameterVector, std::string  parameterName  )

protected

Definition at line 684 of file mitkConnectomicsNetworkMapper3D.cpp.

References mitk::connectomicsRenderingEdgeParameterCentrality, mitk::connectomicsRenderingEdgeParameterConstant, mitk::connectomicsRenderingEdgeParameterWeight, and mitk::eps.

void mitk::ConnectomicsNetworkMapper3D::FillNodeFilterBoolVector ( std::vector< bool > *  boolVector, std::string  parameterName  )

protected

Definition at line 733 of file mitkConnectomicsNetworkMapper3D.cpp.

References mitk::connectomicsRenderingNodeParameterBetweenness, mitk::connectomicsRenderingNodeParameterClustering, and mitk::connectomicsRenderingNodeParameterDegree.

double mitk::ConnectomicsNetworkMapper3D::FillNodeParameterVector ( std::vector< double > *  parameterVector, std::string  parameterName  )

protected

Definition at line 601 of file mitkConnectomicsNetworkMapper3D.cpp.

References mitk::connectomicsRenderingNodeParameterBetweenness, mitk::connectomicsRenderingNodeParameterClustering, mitk::connectomicsRenderingNodeParameterColoringShortestPath, mitk::connectomicsRenderingNodeParameterConstant, mitk::connectomicsRenderingNodeParameterDegree, mitk::eps, and MITK_WARN.

void mitk::ConnectomicsNetworkMapper3D::GenerateDataForRenderer ( mitk::BaseRenderer *  )

overridevirtual

Generate the data needed for rendering into renderer.

Reimplemented from mitk::Mapper.

Definition at line 55 of file mitkConnectomicsNetworkMapper3D.cpp.

References mitk::connectomicsRenderingBalloonAllNodeLabelsName, mitk::connectomicsRenderingBalloonNodeStatsName, mitk::connectomicsRenderingBalloonTextName, mitk::connectomicsRenderingEdgeThresholdFilter, mitk::connectomicsRenderingMITKScheme, mitk::connectomicsRenderingNodeThresholdingFilter, mitk::connectomicsRenderingVTKScheme, GetData(), GetName(), mitk::New(), mitk::StringProperty::New(), and mitk::TextOverlay3D::New().

const mitk::ConnectomicsNetwork * mitk::ConnectomicsNetworkMapper3D::GetInput ( void  )

virtual

Definition at line 397 of file mitkConnectomicsNetworkMapper3D.cpp.

vtkProp * mitk::ConnectomicsNetworkMapper3D::GetVtkProp ( mitk::BaseRenderer *  renderer )

overridevirtual

Implements mitk::VtkMapper.

Definition at line 493 of file mitkConnectomicsNetworkMapper3D.cpp.

mitk::ConnectomicsNetworkMapper3D::mitkClassMacro	(	ConnectomicsNetworkMapper3D	,
		VtkMapper
	)

static Pointer mitk::ConnectomicsNetworkMapper3D::New ( )

static

Referenced by mitk::ConnectomicsObjectFactory::CreateMapper().

bool mitk::ConnectomicsNetworkMapper3D::PropertiesChanged ( )

protected

Returns true if the properties have changed since the last data generation.

Definition at line 498 of file mitkConnectomicsNetworkMapper3D.cpp.

References mitk::connectomicsRenderingEdgeFilteringPropertyName, mitk::connectomicsRenderingEdgeGradientColorParameterName, mitk::connectomicsRenderingEdgeGradientEndColorName, mitk::connectomicsRenderingEdgeGradientStartColorName, mitk::connectomicsRenderingEdgeRadiusEndName, mitk::connectomicsRenderingEdgeRadiusParameterName, mitk::connectomicsRenderingEdgeRadiusStartName, mitk::connectomicsRenderingEdgeThresholdFilterParameterName, mitk::connectomicsRenderingEdgeThresholdFilterThresholdName, mitk::connectomicsRenderingNodeChosenNodeName, mitk::connectomicsRenderingNodeFilteringPropertyName, mitk::connectomicsRenderingNodeGradientColorParameterName, mitk::connectomicsRenderingNodeGradientEndColorName, mitk::connectomicsRenderingNodeGradientStartColorName, mitk::connectomicsRenderingNodeRadiusEndName, mitk::connectomicsRenderingNodeRadiusParameterName, mitk::connectomicsRenderingNodeRadiusStartName, mitk::connectomicsRenderingNodeThresholdFilterParameterName, mitk::connectomicsRenderingNodeThresholdFilterThresholdName, mitk::connectomicsRenderingSchemePropertyName, mitk::GenericProperty< T >::GetValue(), mitk::ColorProperty::GetValue(), mitk::StringProperty::GetValueAsString(), and mitk::EnumerationProperty::GetValueAsString().

void mitk::ConnectomicsNetworkMapper3D::SetDefaultProperties ( DataNode *  node, BaseRenderer *  renderer = nullptr, bool  overwrite = false  )

static

Definition at line 402 of file mitkConnectomicsNetworkMapper3D.cpp.

References mitk::DataNode::AddProperty(), mitk::connectomicsRenderingBalloonTextName, mitk::connectomicsRenderingEdgeFilteringPropertyName, mitk::connectomicsRenderingEdgeGradientColorParameterName, mitk::connectomicsRenderingEdgeGradientEndColorDefault, mitk::connectomicsRenderingEdgeGradientEndColorName, mitk::connectomicsRenderingEdgeGradientStartColorDefault, mitk::connectomicsRenderingEdgeGradientStartColorName, mitk::connectomicsRenderingEdgeRadiusEndDefault, mitk::connectomicsRenderingEdgeRadiusEndName, mitk::connectomicsRenderingEdgeRadiusParameterName, mitk::connectomicsRenderingEdgeRadiusStartDefault, mitk::connectomicsRenderingEdgeRadiusStartName, mitk::connectomicsRenderingEdgeThresholdFilterParameterName, mitk::connectomicsRenderingEdgeThresholdFilterThresholdDefault, mitk::connectomicsRenderingEdgeThresholdFilterThresholdName, mitk::connectomicsRenderingNodeChosenNodeDefault, mitk::connectomicsRenderingNodeChosenNodeName, mitk::connectomicsRenderingNodeFilteringPropertyName, mitk::connectomicsRenderingNodeGradientColorParameterName, mitk::connectomicsRenderingNodeGradientEndColorDefault, mitk::connectomicsRenderingNodeGradientEndColorName, mitk::connectomicsRenderingNodeGradientStartColorDefault, mitk::connectomicsRenderingNodeGradientStartColorName, mitk::connectomicsRenderingNodeRadiusEndDefault, mitk::connectomicsRenderingNodeRadiusEndName, mitk::connectomicsRenderingNodeRadiusParameterName, mitk::connectomicsRenderingNodeRadiusStartDefault, mitk::connectomicsRenderingNodeRadiusStartName, mitk::connectomicsRenderingNodeThresholdFilterParameterName, mitk::connectomicsRenderingNodeThresholdFilterThresholdDefault, mitk::connectomicsRenderingNodeThresholdFilterThresholdName, mitk::connectomicsRenderingSchemePropertyName, mitk::ConnectomicsRenderingNodeFilteringProperty::New(), mitk::ConnectomicsRenderingNodeRadiusParameterProperty::New(), mitk::ConnectomicsRenderingNodeColorParameterProperty::New(), mitk::ConnectomicsRenderingEdgeFilteringProperty::New(), mitk::ConnectomicsRenderingEdgeRadiusParameterProperty::New(), mitk::ConnectomicsRenderingSchemeProperty::New(), mitk::ConnectomicsRenderingEdgeThresholdParameterProperty::New(), mitk::ConnectomicsRenderingEdgeColorParameterProperty::New(), mitk::ConnectomicsRenderingNodeThresholdParameterProperty::New(), and mitk::StringProperty::New().

Referenced by mitk::ConnectomicsObjectFactory::SetDefaultProperties().

void mitk::ConnectomicsNetworkMapper3D::SetVtkMapperImmediateModeRendering ( vtkMapper *  mapper )

static

Definition at line 483 of file mitkConnectomicsNetworkMapper3D.cpp.

void mitk::ConnectomicsNetworkMapper3D::UpdateVtkObjects ( )

protected

Definition at line 488 of file mitkConnectomicsNetworkMapper3D.cpp.

Member Data Documentation

std::string mitk::ConnectomicsNetworkMapper3D::m_AllNodeLabels

protected

Definition at line 143 of file mitkConnectomicsNetworkMapper3D.h.

std::string mitk::ConnectomicsNetworkMapper3D::m_BalloonNodeStats

protected

Definition at line 141 of file mitkConnectomicsNetworkMapper3D.h.

std::string mitk::ConnectomicsNetworkMapper3D::m_BalloonText

protected

Definition at line 140 of file mitkConnectomicsNetworkMapper3D.h.

std::string mitk::ConnectomicsNetworkMapper3D::m_ChosenEdgeFilter

protected

Definition at line 119 of file mitkConnectomicsNetworkMapper3D.h.

std::string mitk::ConnectomicsNetworkMapper3D::m_ChosenNodeFilter

protected

Definition at line 122 of file mitkConnectomicsNetworkMapper3D.h.

std::string mitk::ConnectomicsNetworkMapper3D::m_ChosenNodeLabel

protected

Definition at line 129 of file mitkConnectomicsNetworkMapper3D.h.

std::string mitk::ConnectomicsNetworkMapper3D::m_ChosenRenderingScheme

protected

Definition at line 118 of file mitkConnectomicsNetworkMapper3D.h.

mitk::Color mitk::ConnectomicsNetworkMapper3D::m_EdgeColorEnd

protected

Definition at line 131 of file mitkConnectomicsNetworkMapper3D.h.

std::string mitk::ConnectomicsNetworkMapper3D::m_EdgeColorParameter

protected

Definition at line 137 of file mitkConnectomicsNetworkMapper3D.h.

mitk::Color mitk::ConnectomicsNetworkMapper3D::m_EdgeColorStart

protected

Definition at line 130 of file mitkConnectomicsNetworkMapper3D.h.

double mitk::ConnectomicsNetworkMapper3D::m_EdgeRadiusEnd

protected

Definition at line 133 of file mitkConnectomicsNetworkMapper3D.h.

std::string mitk::ConnectomicsNetworkMapper3D::m_EdgeRadiusParameter

protected

Definition at line 136 of file mitkConnectomicsNetworkMapper3D.h.

double mitk::ConnectomicsNetworkMapper3D::m_EdgeRadiusStart

protected

Definition at line 132 of file mitkConnectomicsNetworkMapper3D.h.

double mitk::ConnectomicsNetworkMapper3D::m_EdgeThreshold

protected

Definition at line 121 of file mitkConnectomicsNetworkMapper3D.h.

std::string mitk::ConnectomicsNetworkMapper3D::m_EdgeThresholdParameter

protected

Definition at line 120 of file mitkConnectomicsNetworkMapper3D.h.

vtkPropAssembly* mitk::ConnectomicsNetworkMapper3D::m_NetworkAssembly

protected

Definition at line 103 of file mitkConnectomicsNetworkMapper3D.h.

Referenced by ConnectomicsNetworkMapper3D().

mitk::Color mitk::ConnectomicsNetworkMapper3D::m_NodeColorEnd

protected

Definition at line 126 of file mitkConnectomicsNetworkMapper3D.h.

std::string mitk::ConnectomicsNetworkMapper3D::m_NodeColorParameter

protected

Definition at line 135 of file mitkConnectomicsNetworkMapper3D.h.

mitk::Color mitk::ConnectomicsNetworkMapper3D::m_NodeColorStart

protected

Definition at line 125 of file mitkConnectomicsNetworkMapper3D.h.

double mitk::ConnectomicsNetworkMapper3D::m_NodeRadiusEnd

protected

Definition at line 128 of file mitkConnectomicsNetworkMapper3D.h.

std::string mitk::ConnectomicsNetworkMapper3D::m_NodeRadiusParameter

protected

Definition at line 134 of file mitkConnectomicsNetworkMapper3D.h.

double mitk::ConnectomicsNetworkMapper3D::m_NodeRadiusStart

protected

Definition at line 127 of file mitkConnectomicsNetworkMapper3D.h.

double mitk::ConnectomicsNetworkMapper3D::m_NodeThreshold

protected

Definition at line 124 of file mitkConnectomicsNetworkMapper3D.h.

std::string mitk::ConnectomicsNetworkMapper3D::m_NodeThresholdParameter

protected

Definition at line 123 of file mitkConnectomicsNetworkMapper3D.h.

mitk::TextOverlay3D::Pointer mitk::ConnectomicsNetworkMapper3D::m_TextOverlay3D

protected

Definition at line 145 of file mitkConnectomicsNetworkMapper3D.h.

mitk::FreeSurferParcellationTranslator::Pointer mitk::ConnectomicsNetworkMapper3D::m_Translator

protected

Definition at line 142 of file mitkConnectomicsNetworkMapper3D.h.

Referenced by ConnectomicsNetworkMapper3D().

---

The documentation for this class was generated from the following files:

• mitkConnectomicsNetworkMapper3D.h
• mitkConnectomicsNetworkMapper3D.cpp