mitk::ConnectomicsNetworkConverter Class Reference

A class giving functions for conversion of connectomics networks into different formats. More...

#include <mitkConnectomicsNetworkConverter.h>

Inheritance diagram for mitk::ConnectomicsNetworkConverter:

Collaboration diagram for mitk::ConnectomicsNetworkConverter:

Public Types
typedef mitk::ConnectomicsNetwork::NetworkType	NetworkType
typedef mitk::ConnectomicsNetwork::VertexDescriptorType	VertexDescriptorType
typedef mitk::ConnectomicsNetwork::EdgeDescriptorType	EdgeDescriptorType
typedef boost::graph_traits< NetworkType >::vertex_iterator	VertexIteratorType
typedef boost::graph_traits< NetworkType >::adjacency_iterator	AdjacencyIteratorType
typedef std::map< EdgeDescriptorType, int >	EdgeIndexStdMapType
typedef boost::associative_property_map< EdgeIndexStdMapType >	EdgeIndexMapType
typedef boost::iterator_property_map< std::vector< double >::iterator, EdgeIndexMapType >	EdgeIteratorPropertyMapType
typedef boost::property_map< NetworkType, boost::vertex_index_t >::type	VertexIndexMapType
typedef boost::iterator_property_map< std::vector< double >::iterator, VertexIndexMapType >	VertexIteratorPropertyMapType

Public Member Functions
	mitkClassMacroItkParent (ConnectomicsNetworkConverter, itk::Object)
Pointer	Clone () const
virtual void	SetNetwork (mitk::ConnectomicsNetwork *_arg)
vnl_matrix< double >	GetNetworkAsVNLAdjacencyMatrix ()
vnl_matrix< double >	GetNetworkAsVNLDegreeMatrix ()

Static Public Member Functions
static Pointer	New ()

Protected Member Functions
	ConnectomicsNetworkConverter ()
	~ConnectomicsNetworkConverter ()

Protected Attributes
mitk::ConnectomicsNetwork::Pointer	m_Network

Detailed Description

A class giving functions for conversion of connectomics networks into different formats.

Definition at line 34 of file mitkConnectomicsNetworkConverter.h.

Member Typedef Documentation

typedef boost::graph_traits<NetworkType>::adjacency_iterator mitk::ConnectomicsNetworkConverter::AdjacencyIteratorType

Definition at line 50 of file mitkConnectomicsNetworkConverter.h.

typedef mitk::ConnectomicsNetwork::EdgeDescriptorType mitk::ConnectomicsNetworkConverter::EdgeDescriptorType

Definition at line 48 of file mitkConnectomicsNetworkConverter.h.

typedef boost::associative_property_map< EdgeIndexStdMapType > mitk::ConnectomicsNetworkConverter::EdgeIndexMapType

Definition at line 52 of file mitkConnectomicsNetworkConverter.h.

typedef std::map<EdgeDescriptorType, int> mitk::ConnectomicsNetworkConverter::EdgeIndexStdMapType

Definition at line 51 of file mitkConnectomicsNetworkConverter.h.

typedef boost::iterator_property_map< std::vector< double >::iterator, EdgeIndexMapType > mitk::ConnectomicsNetworkConverter::EdgeIteratorPropertyMapType

Definition at line 53 of file mitkConnectomicsNetworkConverter.h.

typedef mitk::ConnectomicsNetwork::NetworkType mitk::ConnectomicsNetworkConverter::NetworkType

Definition at line 46 of file mitkConnectomicsNetworkConverter.h.

typedef mitk::ConnectomicsNetwork::VertexDescriptorType mitk::ConnectomicsNetworkConverter::VertexDescriptorType

Definition at line 47 of file mitkConnectomicsNetworkConverter.h.

typedef boost::property_map< NetworkType, boost::vertex_index_t>::type mitk::ConnectomicsNetworkConverter::VertexIndexMapType

Definition at line 54 of file mitkConnectomicsNetworkConverter.h.

typedef boost::iterator_property_map< std::vector< double >::iterator, VertexIndexMapType > mitk::ConnectomicsNetworkConverter::VertexIteratorPropertyMapType

Definition at line 55 of file mitkConnectomicsNetworkConverter.h.

typedef boost::graph_traits<NetworkType>::vertex_iterator mitk::ConnectomicsNetworkConverter::VertexIteratorType

Definition at line 49 of file mitkConnectomicsNetworkConverter.h.

Constructor & Destructor Documentation

mitk::ConnectomicsNetworkConverter::ConnectomicsNetworkConverter ( )

protected

Definition at line 19 of file mitkConnectomicsNetworkConverter.cpp.

mitk::ConnectomicsNetworkConverter::~ConnectomicsNetworkConverter ( )

protected

Definition at line 23 of file mitkConnectomicsNetworkConverter.cpp.

Member Function Documentation

Pointer mitk::ConnectomicsNetworkConverter::Clone

(

)

const

vnl_matrix< double > mitk::ConnectomicsNetworkConverter::GetNetworkAsVNLAdjacencyMatrix

(

)

Definition at line 27 of file mitkConnectomicsNetworkConverter.cpp.

vnl_matrix< double > mitk::ConnectomicsNetworkConverter::GetNetworkAsVNLDegreeMatrix

(

)

Definition at line 50 of file mitkConnectomicsNetworkConverter.cpp.

mitk::ConnectomicsNetworkConverter::mitkClassMacroItkParent	(	ConnectomicsNetworkConverter	,
		itk::Object
	)

Standard class typedefs. Method for creation through the object factory.

static Pointer mitk::ConnectomicsNetworkConverter::New ( )

static

Referenced by mitk::ConnectomicsStatisticsCalculator::CalculateLaplacianMetrics(), and mitk::ConnectomicsStatisticsCalculator::CalculateSpectralMetrics().

virtual void mitk::ConnectomicsNetworkConverter::SetNetwork ( mitk::ConnectomicsNetwork *  _arg )

virtual

Member Data Documentation

mitk::ConnectomicsNetwork::Pointer mitk::ConnectomicsNetworkConverter::m_Network

protected

Definition at line 72 of file mitkConnectomicsNetworkConverter.h.

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The documentation for this class was generated from the following files:

• mitkConnectomicsNetworkConverter.h
• mitkConnectomicsNetworkConverter.cpp