#include <mitkCommandLineParser.h>

Public Types
enum	Type { String, Bool, StringList, Int, Float, InputDirectory, InputFile, OutputDirectory, OutputFile, InputImage }

typedef std::vector< std::string >	StringContainerType

Public Member Functions
	mitkCommandLineParser ()

	~mitkCommandLineParser ()

std::map< std::string, us::Any >	parseArguments (const StringContainerType &arguments, bool *ok=nullptr)

std::map< std::string, us::Any >	parseArguments (int argc, char *argv, bool ok=nullptr)

std::string	errorString () const

const StringContainerType &	unparsedArguments () const

bool	argumentAdded (const std::string &argument) const

bool	argumentParsed (const std::string &argument) const

void	addArgument (const std::string &longarg, const std::string &shortarg, Type type, const std::string &argLabel, const std::string &argHelp=std::string(), const us::Any &defaultValue=us::Any(), bool optional=true, bool ignoreRest=false, bool deprecated=false)

void	addDeprecatedArgument (const std::string &longarg, const std::string &shortarg, const std::string &argLabel, const std::string &argHelp)

bool	setExactMatchRegularExpression (const std::string &argument, const std::string &expression, const std::string &exactMatchFailedMessage)

std::string::size_type	fieldWidth () const

std::string	helpText () const

void	setArgumentPrefix (const std::string &longPrefix, const std::string &shortPrefix)

void	beginGroup (const std::string &description)

void	endGroup ()

void	setStrictModeEnabled (bool strictMode)

void	generateXmlOutput ()

void	setTitle (std::string title)

void	setContributor (std::string contributor)

void	setCategory (std::string category)

void	setDescription (std::string description)

void	changeParameterGroup (std::string name, std::string tooltip)

Detailed Description

The MITK command line parser, based on the CTK command line parser.

Use this class to add information about the command line arguments your program understands and to easily parse them from a given list of strings.

This parser provides the following features:

Add arguments by supplying a long name and/or a short name. Arguments are validated using a regular expression. They can have a default value and a help string.
Deprecated arguments.
Custom regular expressions for argument validation.
Set different argument name prefixes for native platform look and feel.
Create a help text for the command line arguments with support for grouping arguments.

The main difference between the MITK command line parser and the CTK command line parser is that the former does not depend on Qt. Apart from that an image type was added and XML output improved for automatic GUI generation.

std::out is used for output to keep dependencies to a minimum.

Definition at line 77 of file mitkCommandLineParser.h.

Member Typedef Documentation

typedef std::vector<std::string> mitkCommandLineParser::StringContainerType

Definition at line 94 of file mitkCommandLineParser.h.

Member Enumeration Documentation

enum mitkCommandLineParser::Type

Enumerator
String
Bool
StringList
Int
Float
InputDirectory
InputFile
OutputDirectory
OutputFile
InputImage

Definition at line 80 of file mitkCommandLineParser.h.

Constructor & Destructor Documentation

mitkCommandLineParser::mitkCommandLineParser ( )

Definition at line 337 of file mitkCommandLineParser.cpp.

mitkCommandLineParser::~mitkCommandLineParser ( )

Definition at line 349 of file mitkCommandLineParser.cpp.

Member Function Documentation

void mitkCommandLineParser::addArgument	(	const std::string &	longarg,
		const std::string &	shortarg,
		Type	type,
		const std::string &	argLabel,
		const std::string &	argHelp = `std::string()`,
		const us::Any &	defaultValue = `us::Any()`,
		bool	optional = `true`,
		bool	ignoreRest = `false`,
		bool	deprecated = `false`
	)

Adds a command line argument. An argument can have a long name (like –long-argument-name), a short name (like -l), or both. The type of the argument can be specified by using the type parameter. The following types are supported:

Type	# of parameters	Default regular expr	Example
us::Any::String	1	.*	–test-string StringParameter
us::Any::Bool	0	does not apply	–enable-something
us::Any::StringList	-1	.*	–test-list string1 string2
us::Any::Int	1	-?[0-9]+	–test-int -5

The regular expressions are used to validate the parameters of command line arguments. You can restrict the valid set of parameters by calling setExactMatchRegularExpression() for your argument.

Optionally, a help string and a default value can be provided for the argument. If the us::Any type of the default value does not match type, an exception is thrown. Arguments with default values are always returned by parseArguments().

You can also declare an argument deprecated, by setting deprecated to true. Alternatively you can add a deprecated argument by calling addDeprecatedArgument().

If the long or short argument has already been added, or if both are empty strings, the method call has no effect.

Parameters

longarg	The long argument name.
shortarg	The short argument name.
type	The argument type (see the list above for supported types).
argLabel	The label of this argument, when auto generated interface is used.
argHelp	A help string describing the argument.
defaultValue	A default value for the argument.
ignoreRest	All arguments after the current one will be ignored.
deprecated	Declares the argument deprecated.

See also: setExactMatchRegularExpression(); addDeprecatedArgument()

Exceptions

std::logic_error If the us::Any type of defaultValue does not match type, a std::logic_error is thrown.

Definition at line 664 of file mitkCommandLineParser.cpp.

Referenced by ExtractImageStatistics(), FiberJoin(), main(), StartPeakExtraction(), and StartShConversion().

void mitkCommandLineParser::addDeprecatedArgument	(	const std::string &	longarg,
		const std::string &	shortarg,
		const std::string &	argLabel,
		const std::string &	argHelp
	)

Adds a deprecated command line argument. If a deprecated argument is provided on the command line, argHelp is displayed in the console and processing continues with the next argument.

Deprecated arguments are grouped separately at the end of the help text returned by helpText().

Parameters

longarg	The long argument name.
shortarg	The short argument name.
argHelp	A help string describing alternatives to the deprecated argument.

Definition at line 730 of file mitkCommandLineParser.cpp.

bool mitkCommandLineParser::argumentAdded ( const std::string & argument ) const

Checks if the given argument has been added via a call to addArgument().

See also: addArgument()

Parameters

argument The argument to be checked.

Returns: true if the argument was added, false otherwise.

Definition at line 808 of file mitkCommandLineParser.cpp.

bool mitkCommandLineParser::argumentParsed ( const std::string & argument ) const

Checks if the given argument has been parsed successfully by a previous call to parseArguments().

Parameters

argument The argument to be checked.

Returns: true if the argument was parsed, false otherwise.

Definition at line 814 of file mitkCommandLineParser.cpp.

void mitkCommandLineParser::beginGroup ( const std::string & description )

Begins a new group for documenting arguments. All newly added arguments via addArgument() will be put in the new group. You can close the current group by calling endGroup() or be opening a new group.

Note that groups cannot be nested and all arguments which do not belong to a group will be listed at the top of the text created by helpText().

Parameters

description The description of the group

Definition at line 745 of file mitkCommandLineParser.cpp.

void mitkCommandLineParser::changeParameterGroup	(	std::string	name,
		std::string	tooltip
	)

Is used to group several Parameters in one groupbox in the auto generated interface. Default name is "Parameters", with the tooltip: "Groupbox containing parameters."

To change the group of several arguments, call this method before the arguments are added.

Parameters

name	The name of the groupbox.
tooltip	The tooltip of the groupbox.

Definition at line 953 of file mitkCommandLineParser.cpp.

Referenced by main().

void mitkCommandLineParser::endGroup ( )

Ends the current group.

See also: beginGroup(const std::string&)

Definition at line 751 of file mitkCommandLineParser.cpp.

string mitkCommandLineParser::errorString ( ) const

Returns a detailed error description if a call to parseArguments() failed.

Returns: The error description, empty if no error occured.

See also: parseArguments(const StringContainerType&, bool*)

Definition at line 652 of file mitkCommandLineParser.cpp.

std::string::size_type mitkCommandLineParser::fieldWidth ( ) const

The field width for the argument names without the help text.

Returns: The argument names field width in the help text.

Definition at line 739 of file mitkCommandLineParser.cpp.

void mitkCommandLineParser::generateXmlOutput ( )

Is used to generate an XML output for any commandline program.

Definition at line 835 of file mitkCommandLineParser.cpp.

References Bool, Float, InputDirectory, InputFile, InputImage, Int, OutputDirectory, OutputFile, String, and StringList.

string mitkCommandLineParser::helpText ( ) const

Creates a help text containing properly formatted argument names and help strings provided by calls to addArgument(). The arguments can be grouped by using beginGroup() and endGroup().

Parameters

charPad The padding character.

Returns: The formatted help text.

Definition at line 757 of file mitkCommandLineParser.cpp.

Referenced by ExtractImageStatistics(), and main().

map< string, us::Any > mitkCommandLineParser::parseArguments	(	const StringContainerType &	arguments,
		bool *	ok = `nullptr`
	)

Parse a given list of command line arguments.

This method parses a list of string elements considering the known arguments added by calls to addArgument(). If any one of the argument values does not match the corresponding regular expression, ok is set to false and an empty map object is returned.

The keys in the returned map object correspond to the long argument string, if it is not empty. Otherwise, the short argument string is used as key. The us::Any values can safely be converted to the type specified in the addArgument() method call.

Parameters

arguments	A StringContainerType containing command line arguments.
ok	A pointer to a boolean variable. Will be set to `true` if all regular expressions matched, `false` otherwise.

Returns: A map object mapping the long argument (if empty, the short one) to a us::Any containing the value.

Definition at line 355 of file mitkCommandLineParser.cpp.

Referenced by ExtractImageStatistics(), FiberJoin(), main(), StartPeakExtraction(), and StartShConversion().

map< string, us::Any > mitkCommandLineParser::parseArguments	(	int	argc,
		char **	argv,
		bool *	ok = `nullptr`
	)

Convenient method allowing to parse a given list of command line arguments.

See also: parseArguments(const StringContainerType &, bool*)

Definition at line 640 of file mitkCommandLineParser.cpp.

void mitkCommandLineParser::setArgumentPrefix	(	const std::string &	longPrefix,
		const std::string &	shortPrefix
	)

Sets the argument prefix for long and short argument names. This can be used to create native command line arguments without changing the calls to addArgument(). For example on Unix-based systems, long argument names start with "--" and short names with "-", while on Windows argument names always start with "/".

Note that all methods in mitkCommandLineParser which take an argument name expect the name as it was supplied to addArgument.

Example usage:

ctkCommandLineParser parser;
parser.setArgumentPrefix("--", "-");
parser.addArgument("long-argument", "l", us::Any::String);
StringContainerType args;
args << "program name" << "--long-argument Hi";
parser.parseArguments(args);

Parameters

longPrefix	The prefix for long argument names.
shortPrefix	The prefix for short argument names.

Definition at line 823 of file mitkCommandLineParser.cpp.

Referenced by ExtractImageStatistics(), FiberJoin(), main(), StartPeakExtraction(), and StartShConversion().

void mitkCommandLineParser::setCategory ( std::string category )

Is used to categorize the apps in the commandline module.

Parameters

category The category of the app.

Definition at line 943 of file mitkCommandLineParser.cpp.

Referenced by ExtractImageStatistics(), FiberJoin(), main(), StartPeakExtraction(), and StartShConversion().

void mitkCommandLineParser::setContributor ( std::string contributor )

Is used to set the contributor for the help view in the auto generated interface.

Parameters

contributor Contributor of the app.

Definition at line 938 of file mitkCommandLineParser.cpp.

Referenced by ExtractImageStatistics(), FiberJoin(), main(), StartPeakExtraction(), and StartShConversion().

void mitkCommandLineParser::setDescription ( std::string description )

Is used as the help text in the auto generated interface.

Parameters

description A short description for the app.

Definition at line 948 of file mitkCommandLineParser.cpp.

Referenced by ExtractImageStatistics(), FiberJoin(), main(), StartPeakExtraction(), and StartShConversion().

bool mitkCommandLineParser::setExactMatchRegularExpression	(	const std::string &	argument,
		const std::string &	expression,
		const std::string &	exactMatchFailedMessage
	)

Sets a custom regular expression for validating argument parameters. The method errorString() can be used the get the last error description.

Parameters

argument	The previously added long or short argument name.
expression	A regular expression which the arugment parameters must match.
exactMatchFailedMessage	An error message explaining why the parameter did not match.

Returns: true if the argument was found and the regular expression was set, false otherwise.

See also: errorString()

void mitkCommandLineParser::setStrictModeEnabled ( bool strictMode )

Can be used to teach the parser to stop parsing the arguments and return False when an unknown argument is encountered. By default StrictMode is disabled.

See also: parseArguments(const StringContainerType &, bool*)

Definition at line 830 of file mitkCommandLineParser.cpp.

void mitkCommandLineParser::setTitle ( std::string title )

Is used to set the title of the auto generated interface.

Parameters

title The title of the app.

Definition at line 934 of file mitkCommandLineParser.cpp.

Referenced by ExtractImageStatistics(), FiberJoin(), main(), StartPeakExtraction(), and StartShConversion().

const mitkCommandLineParser::StringContainerType & mitkCommandLineParser::unparsedArguments ( ) const

This method returns all unparsed arguments, i.e. all arguments for which no long or short name has been registered via a call to addArgument().

See also: addArgument()

Returns: A list containing unparsed arguments.

Definition at line 658 of file mitkCommandLineParser.cpp.

The documentation for this class was generated from the following files:

Public Types

Public Member Functions

Detailed Description

Member Typedef Documentation

Member Enumeration Documentation

Constructor & Destructor Documentation

Member Function Documentation