GibbsTracking.cpp File Reference

#include <mitkImageCast.h>
#include <mitkQBallImage.h>
#include <mitkTensorImage.h>
#include <mitkFiberBundle.h>
#include <itkGibbsTrackingFilter.h>
#include <itkDiffusionTensor3D.h>
#include <itkShCoefficientImageImporter.h>
#include <mitkImageToItk.h>
#include <mitkIOUtil.h>
#include "mitkCommandLineParser.h"
#include <boost/algorithm/string.hpp>
#include <itkFlipImageFilter.h>
#include <mitkCoreObjectFactory.h>

Go to the source code of this file.

Functions
template<int shOrder>
itk::ShCoefficientImageImporter< float, shOrder >::QballImageType::Pointer	TemplatedConvertShCoeffs (mitk::Image *mitkImg, int toolkit, bool noFlip=false)
int	main (int argc, char *argv[])
	Perform global fiber tractography (Gibbs tractography) More...

Function Documentation

int main	(	int	argc,
		char *	argv[]
	)

Perform global fiber tractography (Gibbs tractography)

Definition at line 87 of file GibbsTracking.cpp.

References mitkCommandLineParser::addArgument(), us::any_cast(), mitkCommandLineParser::Bool, mitk::CastToItkImage(), equals(), mitkCommandLineParser::InputFile, mitk::IOUtil::LoadImage(), mitk::New(), mitkCommandLineParser::OutputFile, mitkCommandLineParser::parseArguments(), mitk::IOUtil::SaveBaseData(), mitkCommandLineParser::setArgumentPrefix(), mitkCommandLineParser::setCategory(), mitkCommandLineParser::setContributor(), mitkCommandLineParser::setDescription(), mitkCommandLineParser::setTitle(), and mitkCommandLineParser::String.

template<int shOrder>

itk::ShCoefficientImageImporter< float, shOrder >::QballImageType::Pointer TemplatedConvertShCoeffs	(	mitk::Image *	mitkImg,
		int	toolkit,
		bool	noFlip = false
	)

Definition at line 32 of file GibbsTracking.cpp.

References mitk::New().